Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 AC025048.3-201ENST00000590609 569 ntBASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 AC005702.4-201ENST00000618393 416 ntBASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 IGHV3-72-202ENST00000621503 303 ntBASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 AC007431.3-201ENST00000623221 587 ntBASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 KRT17P7-201ENST00000451704 1104 ntBASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 INE1-201ENST00000456273 945 ntBASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 TPRX2P-201ENST00000535362 881 ntBASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
FBXO28Q9NVF7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
FBXO28Q9NVF7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FBXO28Q9NVF7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FBXO28Q9NVF7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FBXO28Q9NVF7 AC087499.6-201ENST00000411576 835 ntBASIC18.64■□□□□ 0.57
FBXO28Q9NVF7 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
FBXO28Q9NVF7 U91328.1-201ENST00000437528 223 ntBASIC18.64■□□□□ 0.57
FBXO28Q9NVF7 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FBXO28Q9NVF7 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.64■□□□□ 0.57
FBXO28Q9NVF7 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.64■□□□□ 0.57
FBXO28Q9NVF7 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.64■□□□□ 0.57
FBXO28Q9NVF7 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.64■□□□□ 0.57
FBXO28Q9NVF7 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.64■□□□□ 0.57
FBXO28Q9NVF7 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.64■□□□□ 0.57
FBXO28Q9NVF7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
FBXO28Q9NVF7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
FBXO28Q9NVF7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FBXO28Q9NVF7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.64■□□□□ 0.57
FBXO28Q9NVF7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
FBXO28Q9NVF7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.64■□□□□ 0.57
FBXO28Q9NVF7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
FBXO28Q9NVF7 AL391825.1-201ENST00000457671 1364 ntBASIC18.64■□□□□ 0.57
FBXO28Q9NVF7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
FBXO28Q9NVF7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FBXO28Q9NVF7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
FBXO28Q9NVF7 AL592424.1-201ENST00000563624 1536 ntBASIC18.64■□□□□ 0.57
FBXO28Q9NVF7 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
FBXO28Q9NVF7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
FBXO28Q9NVF7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
FBXO28Q9NVF7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
FBXO28Q9NVF7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
FBXO28Q9NVF7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FBXO28Q9NVF7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
FBXO28Q9NVF7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FBXO28Q9NVF7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms