Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS4Q9NQG7 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HPS4Q9NQG7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HPS4Q9NQG7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HPS4Q9NQG7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 GK-202ENST00000378941 458 ntTSL 3 BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 AL080243.2-201ENST00000418783 582 ntBASIC16.89■□□□□ 0.29
HPS4Q9NQG7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 RN7SL692P-201ENST00000464677 288 ntBASIC16.89■□□□□ 0.29
HPS4Q9NQG7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 AC004840.1-201ENST00000636359 365 ntBASIC16.89■□□□□ 0.29
HPS4Q9NQG7 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 AL358472.5-202ENST00000641448 1267 ntBASIC16.89■□□□□ 0.29
HPS4Q9NQG7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HPS4Q9NQG7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms