Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
ELL3Q9HB65 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ELL3Q9HB65 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ELL3Q9HB65 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ELL3Q9HB65 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.35□□□□□ -0.11
ELL3Q9HB65 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ELL3Q9HB65 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.35□□□□□ -0.11
ELL3Q9HB65 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ELL3Q9HB65 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.35□□□□□ -0.11
ELL3Q9HB65 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ELL3Q9HB65 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ELL3Q9HB65 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.35□□□□□ -0.11
ELL3Q9HB65 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ELL3Q9HB65 FAAHP1-202ENST00000446499 1238 ntBASIC14.35□□□□□ -0.11
ELL3Q9HB65 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ELL3Q9HB65 RNPS1P1-201ENST00000507437 918 ntBASIC14.35□□□□□ -0.11
ELL3Q9HB65 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ELL3Q9HB65 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.35□□□□□ -0.11
ELL3Q9HB65 AP002469.2-201ENST00000531724 424 ntBASIC14.35□□□□□ -0.11
ELL3Q9HB65 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
ELL3Q9HB65 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.35□□□□□ -0.11
ELL3Q9HB65 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.35□□□□□ -0.11
ELL3Q9HB65 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.35□□□□□ -0.11
ELL3Q9HB65 AC013467.2-201ENST00000605472 835 ntBASIC14.35□□□□□ -0.11
ELL3Q9HB65 AL139424.1-201ENST00000607572 797 ntBASIC14.35□□□□□ -0.11
ELL3Q9HB65 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
ELL3Q9HB65 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ELL3Q9HB65 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ELL3Q9HB65 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.35□□□□□ -0.11
ELL3Q9HB65 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ELL3Q9HB65 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.35□□□□□ -0.11
ELL3Q9HB65 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.35□□□□□ -0.11
ELL3Q9HB65 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.35□□□□□ -0.11
ELL3Q9HB65 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ELL3Q9HB65 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ELL3Q9HB65 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ELL3Q9HB65 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.35□□□□□ -0.11
ELL3Q9HB65 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.35□□□□□ -0.11
ELL3Q9HB65 AL671710.1-201ENST00000610245 2349 ntBASIC14.35□□□□□ -0.11
ELL3Q9HB65 TOP3BP1-201ENST00000420768 1380 ntBASIC14.34□□□□□ -0.11
ELL3Q9HB65 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.34□□□□□ -0.11
ELL3Q9HB65 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ELL3Q9HB65 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.34□□□□□ -0.11
ELL3Q9HB65 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.34□□□□□ -0.11
ELL3Q9HB65 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ELL3Q9HB65 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ELL3Q9HB65 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.34□□□□□ -0.11
ELL3Q9HB65 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ELL3Q9HB65 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ELL3Q9HB65 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ELL3Q9HB65 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
ELL3Q9HB65 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.34□□□□□ -0.11
ELL3Q9HB65 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ELL3Q9HB65 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.34□□□□□ -0.11
ELL3Q9HB65 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ELL3Q9HB65 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ELL3Q9HB65 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ELL3Q9HB65 MRPL3P1-201ENST00000400109 1033 ntBASIC14.34□□□□□ -0.11
ELL3Q9HB65 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ELL3Q9HB65 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.34□□□□□ -0.11
ELL3Q9HB65 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
ELL3Q9HB65 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ELL3Q9HB65 HNRNPDP1-201ENST00000439535 754 ntBASIC14.34□□□□□ -0.11
ELL3Q9HB65 AC009078.2-202ENST00000463353 338 ntBASIC14.34□□□□□ -0.11
ELL3Q9HB65 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.34□□□□□ -0.11
ELL3Q9HB65 AC139887.3-201ENST00000568585 713 ntBASIC14.34□□□□□ -0.11
ELL3Q9HB65 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.34□□□□□ -0.11
ELL3Q9HB65 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.34□□□□□ -0.11
ELL3Q9HB65 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.34□□□□□ -0.11
ELL3Q9HB65 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.34□□□□□ -0.11
ELL3Q9HB65 AC104692.2-201ENST00000603054 253 ntBASIC14.34□□□□□ -0.11
ELL3Q9HB65 AL589182.2-201ENST00000619332 1049 ntBASIC14.34□□□□□ -0.11
ELL3Q9HB65 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.34□□□□□ -0.11
ELL3Q9HB65 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.34□□□□□ -0.11
ELL3Q9HB65 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ELL3Q9HB65 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ELL3Q9HB65 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ELL3Q9HB65 PI4KAP1-204ENST00000612579 1703 ntBASIC14.34□□□□□ -0.11
ELL3Q9HB65 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ELL3Q9HB65 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.34□□□□□ -0.11
ELL3Q9HB65 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
ELL3Q9HB65 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ELL3Q9HB65 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ELL3Q9HB65 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.34□□□□□ -0.11
ELL3Q9HB65 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ELL3Q9HB65 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.34□□□□□ -0.11
ELL3Q9HB65 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ELL3Q9HB65 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
ELL3Q9HB65 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ELL3Q9HB65 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ELL3Q9HB65 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ELL3Q9HB65 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ELL3Q9HB65 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
ELL3Q9HB65 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ELL3Q9HB65 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.33□□□□□ -0.11
ELL3Q9HB65 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ELL3Q9HB65 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.33□□□□□ -0.11
ELL3Q9HB65 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ELL3Q9HB65 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ELL3Q9HB65 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms