Protein–RNA interactions for Protein: Q9C035

TRIM5, Tripartite motif-containing protein 5, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM5Q9C035 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM5Q9C035 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM5Q9C035 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
TRIM5Q9C035 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM5Q9C035 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.3■□□□□ 0.52
TRIM5Q9C035 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM5Q9C035 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.3■□□□□ 0.52
TRIM5Q9C035 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM5Q9C035 AC097493.4-201ENST00000641197 219 ntBASIC18.3■□□□□ 0.52
TRIM5Q9C035 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM5Q9C035 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM5Q9C035 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM5Q9C035 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
TRIM5Q9C035 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM5Q9C035 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM5Q9C035 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM5Q9C035 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM5Q9C035 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM5Q9C035 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
TRIM5Q9C035 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM5Q9C035 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM5Q9C035 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM5Q9C035 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM5Q9C035 AL009178.2-201ENST00000597278 2719 ntBASIC18.29■□□□□ 0.52
TRIM5Q9C035 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM5Q9C035 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM5Q9C035 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM5Q9C035 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM5Q9C035 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM5Q9C035 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TRIM5Q9C035 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC18.29■□□□□ 0.52
TRIM5Q9C035 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
TRIM5Q9C035 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM5Q9C035 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TRIM5Q9C035 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM5Q9C035 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM5Q9C035 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM5Q9C035 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM5Q9C035 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM5Q9C035 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.29■□□□□ 0.52
TRIM5Q9C035 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM5Q9C035 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM5Q9C035 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM5Q9C035 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.29■□□□□ 0.52
TRIM5Q9C035 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM5Q9C035 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM5Q9C035 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.29■□□□□ 0.52
TRIM5Q9C035 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM5Q9C035 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.29■□□□□ 0.52
TRIM5Q9C035 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM5Q9C035 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM5Q9C035 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.29■□□□□ 0.52
TRIM5Q9C035 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.29■□□□□ 0.52
TRIM5Q9C035 Z69720.1-201ENST00000601483 472 ntBASIC18.29■□□□□ 0.52
TRIM5Q9C035 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.29■□□□□ 0.52
TRIM5Q9C035 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM5Q9C035 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
TRIM5Q9C035 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM5Q9C035 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM5Q9C035 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM5Q9C035 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM5Q9C035 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM5Q9C035 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.29■□□□□ 0.52
TRIM5Q9C035 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC18.29■□□□□ 0.52
TRIM5Q9C035 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM5Q9C035 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM5Q9C035 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM5Q9C035 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TRIM5Q9C035 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM5Q9C035 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TRIM5Q9C035 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TRIM5Q9C035 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM5Q9C035 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TRIM5Q9C035 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM5Q9C035 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM5Q9C035 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM5Q9C035 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM5Q9C035 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TRIM5Q9C035 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM5Q9C035 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM5Q9C035 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM5Q9C035 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM5Q9C035 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TRIM5Q9C035 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM5Q9C035 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM5Q9C035 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.28■□□□□ 0.52
TRIM5Q9C035 AL136038.3-201ENST00000561909 1096 ntBASIC18.28■□□□□ 0.52
TRIM5Q9C035 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
TRIM5Q9C035 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM5Q9C035 AL121672.3-201ENST00000608644 468 ntBASIC18.28■□□□□ 0.52
TRIM5Q9C035 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM5Q9C035 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM5Q9C035 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
TRIM5Q9C035 AC020658.6-201ENST00000623564 1870 ntBASIC18.28■□□□□ 0.52
TRIM5Q9C035 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TRIM5Q9C035 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM5Q9C035 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM5Q9C035 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
TRIM5Q9C035 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TRIM5Q9C035 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms