Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 AL133338.1-201ENST00000565695 1517 ntBASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 AL691432.1-201ENST00000596308 1422 ntBASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 AC074338.1-201ENST00000416825 156 ntBASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 KLF2P4-201ENST00000451959 1225 ntBASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 RNA5SP412-201ENST00000516234 123 ntBASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 APRT-204ENST00000563655 709 ntTSL 5 BASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 MIR6787-201ENST00000616675 61 ntBASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 CU634019.7-201ENST00000624153 1185 ntBASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 FP236241.2-201ENST00000624906 1185 ntBASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTFDC1Q9BY42 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 GGT3P-204ENST00000453783 1664 ntBASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTFDC1Q9BY42 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
RTFDC1Q9BY42 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTFDC1Q9BY42 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTFDC1Q9BY42 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RTFDC1Q9BY42 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTFDC1Q9BY42 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTFDC1Q9BY42 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RTFDC1Q9BY42 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.59■□□□□ 0.73
RTFDC1Q9BY42 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTFDC1Q9BY42 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTFDC1Q9BY42 APOA1-205ENST00000375329 927 ntTSL 2 BASIC19.59■□□□□ 0.73
RTFDC1Q9BY42 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RTFDC1Q9BY42 AZGP1P1-201ENST00000411909 902 ntBASIC19.59■□□□□ 0.73
RTFDC1Q9BY42 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC19.59■□□□□ 0.73
RTFDC1Q9BY42 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC19.59■□□□□ 0.73
RTFDC1Q9BY42 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC19.59■□□□□ 0.73
RTFDC1Q9BY42 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms