Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 OR6D1P-203ENST00000641209 4860 ntBASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 KRT18P28-201ENST00000453838 1332 ntBASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 AC025580.3-201ENST00000617932 1424 ntBASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 CNN2P11-201ENST00000429351 262 ntBASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 AC074386.1-202ENST00000463561 864 ntBASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 CXCL1P1-201ENST00000502804 216 ntBASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 AL355385.1-201ENST00000606123 409 ntBASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF4Q9BUZ4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 METTL21AP1-201ENST00000438852 635 ntBASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 AL139327.4-201ENST00000612362 153 ntBASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF4Q9BUZ4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms