Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 INIP-202ENST00000374236 874 ntTSL 2 BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 RNU1-129P-201ENST00000384064 167 ntBASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 VMO1-203ENST00000416307 712 ntTSL 2 BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 RNPS1P1-201ENST00000507437 918 ntBASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 MIR3909-201ENST00000579518 119 ntBASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 U1.21-201ENST00000580816 167 ntBASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 MYB-201ENST00000316528 3571 ntTSL 5 BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 MYB-241ENST00000616088 3573 ntTSL 5 BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
SHANK2-AS3Q9BTD1 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 PRAL-201ENST00000624952 3286 ntBASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 FAM185BP-201ENST00000443595 716 ntBASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 AL031055.1-201ENST00000606362 631 ntBASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 ACTL9-202ENST00000612068 1252 ntBASIC12.6□□□□□ -0.39
SHANK2-AS3Q9BTD1 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms