Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 AC092850.2-201ENST00000623821 2697 ntBASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 AC073621.1-201ENST00000392730 636 ntBASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 KRT18P27-201ENST00000427733 1299 ntBASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 SAPCD2P3-201ENST00000455031 850 ntBASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 PRELID1P1-202ENST00000567272 903 ntBASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 AC129492.6-201ENST00000611383 1305 ntBASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HDHD3Q9BSH5 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
HDHD3Q9BSH5 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HDHD3Q9BSH5 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HDHD3Q9BSH5 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.83□□□□□ -0.19
HDHD3Q9BSH5 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
HDHD3Q9BSH5 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.83□□□□□ -0.2
HDHD3Q9BSH5 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
HDHD3Q9BSH5 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
HDHD3Q9BSH5 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.83□□□□□ -0.2
HDHD3Q9BSH5 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
HDHD3Q9BSH5 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HDHD3Q9BSH5 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HDHD3Q9BSH5 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.83□□□□□ -0.2
HDHD3Q9BSH5 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HDHD3Q9BSH5 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.83□□□□□ -0.2
HDHD3Q9BSH5 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HDHD3Q9BSH5 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HDHD3Q9BSH5 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.83□□□□□ -0.2
HDHD3Q9BSH5 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC13.83□□□□□ -0.2
HDHD3Q9BSH5 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.83□□□□□ -0.2
HDHD3Q9BSH5 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.83□□□□□ -0.2
HDHD3Q9BSH5 PRR29-207ENST00000580752 458 ntTSL 3 BASIC13.83□□□□□ -0.2
HDHD3Q9BSH5 GGTLC5P-201ENST00000617623 998 ntBASIC13.83□□□□□ -0.2
HDHD3Q9BSH5 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.83□□□□□ -0.2
HDHD3Q9BSH5 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
HDHD3Q9BSH5 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HDHD3Q9BSH5 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HDHD3Q9BSH5 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HDHD3Q9BSH5 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HDHD3Q9BSH5 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.82□□□□□ -0.2
HDHD3Q9BSH5 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.82□□□□□ -0.2
HDHD3Q9BSH5 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HDHD3Q9BSH5 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HDHD3Q9BSH5 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.82□□□□□ -0.2
HDHD3Q9BSH5 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.82□□□□□ -0.2
HDHD3Q9BSH5 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.82□□□□□ -0.2
HDHD3Q9BSH5 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.82□□□□□ -0.2
HDHD3Q9BSH5 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.82□□□□□ -0.2
HDHD3Q9BSH5 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HDHD3Q9BSH5 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HDHD3Q9BSH5 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HDHD3Q9BSH5 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms