Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 HNRNPA1P32-201ENST00000396326 963 ntBASIC21.24■□□□□ 0.99
ABCA3Q99758 AC104457.1-201ENST00000401024 814 ntBASIC21.24■□□□□ 0.99
ABCA3Q99758 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC21.24■□□□□ 0.99
ABCA3Q99758 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC21.24■□□□□ 0.99
ABCA3Q99758 BX284668.4-201ENST00000453917 508 ntBASIC21.24■□□□□ 0.99
ABCA3Q99758 AKR7A2P1-201ENST00000460134 915 ntBASIC21.24■□□□□ 0.99
ABCA3Q99758 IMP3P2-201ENST00000489760 475 ntBASIC21.24■□□□□ 0.99
ABCA3Q99758 MIR3619-201ENST00000579667 83 ntBASIC21.24■□□□□ 0.99
ABCA3Q99758 MIR4706-201ENST00000582134 82 ntBASIC21.24■□□□□ 0.99
ABCA3Q99758 CYGB-203ENST00000589145 788 ntTSL 3 BASIC21.24■□□□□ 0.99
ABCA3Q99758 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC21.24■□□□□ 0.99
ABCA3Q99758 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
ABCA3Q99758 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ABCA3Q99758 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ABCA3Q99758 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ABCA3Q99758 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC21.24■□□□□ 0.99
ABCA3Q99758 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC21.24■□□□□ 0.99
ABCA3Q99758 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC21.24■□□□□ 0.99
ABCA3Q99758 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ABCA3Q99758 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ABCA3Q99758 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC21.24■□□□□ 0.99
ABCA3Q99758 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ABCA3Q99758 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
ABCA3Q99758 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ABCA3Q99758 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC21.24■□□□□ 0.99
ABCA3Q99758 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
ABCA3Q99758 AP001582.1-201ENST00000525856 295 ntBASIC21.24■□□□□ 0.99
ABCA3Q99758 CMC2-214ENST00000565925 640 ntTSL 5 BASIC21.24■□□□□ 0.99
ABCA3Q99758 AC097359.3-201ENST00000603982 1210 ntBASIC21.24■□□□□ 0.99
ABCA3Q99758 ECM1P1-201ENST00000604092 1279 ntBASIC21.24■□□□□ 0.99
ABCA3Q99758 AC093813.1-201ENST00000605066 256 ntBASIC21.24■□□□□ 0.99
ABCA3Q99758 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
ABCA3Q99758 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ABCA3Q99758 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ABCA3Q99758 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
ABCA3Q99758 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.23■□□□□ 0.99
ABCA3Q99758 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC21.23■□□□□ 0.99
ABCA3Q99758 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
ABCA3Q99758 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ABCA3Q99758 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ABCA3Q99758 FOS-202ENST00000535987 1402 ntTSL 2 BASIC21.23■□□□□ 0.99
ABCA3Q99758 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC21.23■□□□□ 0.99
ABCA3Q99758 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ABCA3Q99758 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ABCA3Q99758 SDCCAG3P2-201ENST00000326105 1023 ntBASIC21.23■□□□□ 0.99
ABCA3Q99758 AC005077.2-201ENST00000449786 690 ntBASIC21.23■□□□□ 0.99
ABCA3Q99758 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
ABCA3Q99758 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ABCA3Q99758 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ABCA3Q99758 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC21.23■□□□□ 0.99
ABCA3Q99758 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
ABCA3Q99758 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ABCA3Q99758 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
ABCA3Q99758 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC21.23■□□□□ 0.99
ABCA3Q99758 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ABCA3Q99758 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
ABCA3Q99758 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC21.22■□□□□ 0.99
ABCA3Q99758 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.22■□□□□ 0.99
ABCA3Q99758 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC21.22■□□□□ 0.99
ABCA3Q99758 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.22■□□□□ 0.99
ABCA3Q99758 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ABCA3Q99758 AC091046.1-201ENST00000331871 207 ntBASIC21.22■□□□□ 0.99
ABCA3Q99758 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ABCA3Q99758 HOMER2P2-201ENST00000451621 847 ntBASIC21.22■□□□□ 0.99
ABCA3Q99758 NDUFV2P1-201ENST00000596415 907 ntBASIC21.22■□□□□ 0.99
ABCA3Q99758 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC21.22■□□□□ 0.99
ABCA3Q99758 LINC01144-201ENST00000626198 1710 ntBASIC21.22■□□□□ 0.99
ABCA3Q99758 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC21.22■□□□□ 0.99
ABCA3Q99758 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ABCA3Q99758 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
ABCA3Q99758 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.22■□□□□ 0.99
ABCA3Q99758 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ABCA3Q99758 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC21.22■□□□□ 0.99
ABCA3Q99758 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC21.22■□□□□ 0.99
ABCA3Q99758 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC21.22■□□□□ 0.99
ABCA3Q99758 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ABCA3Q99758 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
ABCA3Q99758 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ABCA3Q99758 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC21.21■□□□□ 0.99
ABCA3Q99758 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
ABCA3Q99758 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC21.21■□□□□ 0.99
ABCA3Q99758 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ABCA3Q99758 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
ABCA3Q99758 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC21.21■□□□□ 0.99
ABCA3Q99758 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC21.21■□□□□ 0.99
ABCA3Q99758 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ABCA3Q99758 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ABCA3Q99758 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ABCA3Q99758 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ABCA3Q99758 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ABCA3Q99758 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ABCA3Q99758 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ABCA3Q99758 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ABCA3Q99758 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC21.21■□□□□ 0.99
ABCA3Q99758 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.21■□□□□ 0.99
ABCA3Q99758 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ABCA3Q99758 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC21.21■□□□□ 0.99
ABCA3Q99758 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC21.21■□□□□ 0.99
ABCA3Q99758 HCG18-245ENST00000602550 559 ntTSL 4 BASIC21.21■□□□□ 0.99
ABCA3Q99758 AC128714.1-201ENST00000637035 887 ntBASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms