Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDCA3Q99618 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.8■□□□□ 0.28
CDCA3Q99618 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDCA3Q99618 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.8■□□□□ 0.28
CDCA3Q99618 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.79■□□□□ 0.28
CDCA3Q99618 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDCA3Q99618 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.79■□□□□ 0.28
CDCA3Q99618 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CDCA3Q99618 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDCA3Q99618 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDCA3Q99618 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDCA3Q99618 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.79■□□□□ 0.28
CDCA3Q99618 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.79■□□□□ 0.28
CDCA3Q99618 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.79■□□□□ 0.28
CDCA3Q99618 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDCA3Q99618 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.79■□□□□ 0.28
CDCA3Q99618 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDCA3Q99618 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDCA3Q99618 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDCA3Q99618 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDCA3Q99618 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.79■□□□□ 0.28
CDCA3Q99618 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.79■□□□□ 0.28
CDCA3Q99618 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.79■□□□□ 0.28
CDCA3Q99618 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDCA3Q99618 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CDCA3Q99618 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDCA3Q99618 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDCA3Q99618 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CDCA3Q99618 C1QBPP1-201ENST00000400117 770 ntBASIC16.79■□□□□ 0.28
CDCA3Q99618 AC016694.1-201ENST00000434179 700 ntBASIC16.79■□□□□ 0.28
CDCA3Q99618 TARDBPP1-201ENST00000442013 1203 ntBASIC16.79■□□□□ 0.28
CDCA3Q99618 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
CDCA3Q99618 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.79■□□□□ 0.28
CDCA3Q99618 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.79■□□□□ 0.28
CDCA3Q99618 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.79■□□□□ 0.28
CDCA3Q99618 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.79■□□□□ 0.28
CDCA3Q99618 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CDCA3Q99618 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.79■□□□□ 0.28
CDCA3Q99618 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.79■□□□□ 0.28
CDCA3Q99618 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.79■□□□□ 0.28
CDCA3Q99618 AC010328.2-201ENST00000597698 1111 ntBASIC16.79■□□□□ 0.28
CDCA3Q99618 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDCA3Q99618 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDCA3Q99618 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CDCA3Q99618 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDCA3Q99618 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.79■□□□□ 0.28
CDCA3Q99618 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CDCA3Q99618 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.79■□□□□ 0.28
CDCA3Q99618 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDCA3Q99618 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
CDCA3Q99618 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.79■□□□□ 0.28
CDCA3Q99618 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDCA3Q99618 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDCA3Q99618 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDCA3Q99618 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDCA3Q99618 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDCA3Q99618 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.78■□□□□ 0.28
CDCA3Q99618 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.78■□□□□ 0.28
CDCA3Q99618 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDCA3Q99618 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CDCA3Q99618 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDCA3Q99618 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.78■□□□□ 0.28
CDCA3Q99618 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.78■□□□□ 0.28
CDCA3Q99618 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CDCA3Q99618 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDCA3Q99618 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDCA3Q99618 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDCA3Q99618 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDCA3Q99618 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDCA3Q99618 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDCA3Q99618 POU5F1P6-201ENST00000466990 990 ntBASIC16.78■□□□□ 0.28
CDCA3Q99618 AC099548.2-209ENST00000480264 625 ntBASIC16.78■□□□□ 0.28
CDCA3Q99618 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.78■□□□□ 0.28
CDCA3Q99618 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDCA3Q99618 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CDCA3Q99618 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.78■□□□□ 0.28
CDCA3Q99618 AC120045.2-201ENST00000567334 178 ntBASIC16.78■□□□□ 0.28
CDCA3Q99618 AP001063.1-201ENST00000568332 529 ntBASIC16.78■□□□□ 0.28
CDCA3Q99618 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDCA3Q99618 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.78■□□□□ 0.28
CDCA3Q99618 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.78■□□□□ 0.28
CDCA3Q99618 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.78■□□□□ 0.28
CDCA3Q99618 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDCA3Q99618 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CDCA3Q99618 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.78■□□□□ 0.28
CDCA3Q99618 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CDCA3Q99618 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDCA3Q99618 GGT3P-204ENST00000453783 1664 ntBASIC16.78■□□□□ 0.28
CDCA3Q99618 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CDCA3Q99618 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDCA3Q99618 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDCA3Q99618 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
CDCA3Q99618 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDCA3Q99618 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDCA3Q99618 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.77■□□□□ 0.28
CDCA3Q99618 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDCA3Q99618 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.77■□□□□ 0.28
CDCA3Q99618 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.77■□□□□ 0.28
CDCA3Q99618 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDCA3Q99618 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms