Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPRD1AQ96P16 AC018529.1-201ENST00000613063 361 ntBASIC16.83■□□□□ 0.28
RPRD1AQ96P16 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RPRD1AQ96P16 AC106028.4-201ENST00000614509 607 ntBASIC16.83■□□□□ 0.28
RPRD1AQ96P16 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPRD1AQ96P16 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RPRD1AQ96P16 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RPRD1AQ96P16 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPRD1AQ96P16 AL662844.4-201ENST00000606367 2838 ntBASIC16.83■□□□□ 0.28
RPRD1AQ96P16 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RPRD1AQ96P16 AC084018.2-201ENST00000613093 2607 ntBASIC16.83■□□□□ 0.28
RPRD1AQ96P16 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 AC024267.1-201ENST00000582320 895 ntBASIC16.82■□□□□ 0.28
RPRD1AQ96P16 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 AC003101.2-201ENST00000612557 442 ntBASIC16.82■□□□□ 0.28
RPRD1AQ96P16 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 REXO1L8P-201ENST00000604378 1897 ntBASIC16.82■□□□□ 0.28
RPRD1AQ96P16 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.82■□□□□ 0.28
RPRD1AQ96P16 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 AC092364.2-201ENST00000596710 2692 ntBASIC16.81■□□□□ 0.28
RPRD1AQ96P16 TUBB3P1-201ENST00000405796 1332 ntBASIC16.81■□□□□ 0.28
RPRD1AQ96P16 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 RFPL4AP1-201ENST00000530883 850 ntBASIC16.81■□□□□ 0.28
RPRD1AQ96P16 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 AC027796.2-201ENST00000575326 344 ntBASIC16.81■□□□□ 0.28
RPRD1AQ96P16 MIR4453-201ENST00000584019 89 ntBASIC16.81■□□□□ 0.28
RPRD1AQ96P16 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPRD1AQ96P16 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms