Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 ARMC10P1-201ENST00000313754 855 ntBASIC14.09□□□□□ -0.15
CMTM3Q96MX0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 HAUS4P1-201ENST00000406739 1145 ntBASIC14.09□□□□□ -0.15
CMTM3Q96MX0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 AC087641.1-201ENST00000557561 1021 ntBASIC14.09□□□□□ -0.15
CMTM3Q96MX0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 AC083849.1-201ENST00000615227 514 ntBASIC14.09□□□□□ -0.15
CMTM3Q96MX0 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 AC013726.1-201ENST00000563747 2285 ntBASIC14.09□□□□□ -0.15
CMTM3Q96MX0 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CMTM3Q96MX0 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CMTM3Q96MX0 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.08□□□□□ -0.15
CMTM3Q96MX0 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
CMTM3Q96MX0 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CMTM3Q96MX0 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.08□□□□□ -0.15
CMTM3Q96MX0 AC105250.1-201ENST00000509378 2057 ntBASIC14.08□□□□□ -0.15
CMTM3Q96MX0 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
CMTM3Q96MX0 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 AC011498.5-201ENST00000592027 486 ntBASIC14.08□□□□□ -0.16
CMTM3Q96MX0 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 AL390755.1-201ENST00000623716 2027 ntBASIC14.08□□□□□ -0.16
CMTM3Q96MX0 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms