Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.35■□□□□ 0.21
SHDQ96IW2 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.35■□□□□ 0.21
SHDQ96IW2 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
SHDQ96IW2 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.35■□□□□ 0.21
SHDQ96IW2 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.35■□□□□ 0.21
SHDQ96IW2 AP000812.2-201ENST00000538934 718 ntBASIC16.35■□□□□ 0.21
SHDQ96IW2 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
SHDQ96IW2 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.35■□□□□ 0.21
SHDQ96IW2 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHDQ96IW2 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.35■□□□□ 0.21
SHDQ96IW2 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SHDQ96IW2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHDQ96IW2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.35■□□□□ 0.21
SHDQ96IW2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.35■□□□□ 0.21
SHDQ96IW2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.35■□□□□ 0.21
SHDQ96IW2 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHDQ96IW2 U82695.1-201ENST00000635752 1889 ntBASIC16.35■□□□□ 0.21
SHDQ96IW2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHDQ96IW2 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SHDQ96IW2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHDQ96IW2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHDQ96IW2 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHDQ96IW2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.35■□□□□ 0.21
SHDQ96IW2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHDQ96IW2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHDQ96IW2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SHDQ96IW2 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SHDQ96IW2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.34■□□□□ 0.21
SHDQ96IW2 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHDQ96IW2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHDQ96IW2 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.34■□□□□ 0.21
SHDQ96IW2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHDQ96IW2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.34■□□□□ 0.21
SHDQ96IW2 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.34■□□□□ 0.21
SHDQ96IW2 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
SHDQ96IW2 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHDQ96IW2 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SHDQ96IW2 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
SHDQ96IW2 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.34■□□□□ 0.21
SHDQ96IW2 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHDQ96IW2 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.34■□□□□ 0.21
SHDQ96IW2 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.34■□□□□ 0.21
SHDQ96IW2 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.34■□□□□ 0.21
SHDQ96IW2 FAM86LP-201ENST00000478302 853 ntBASIC16.34■□□□□ 0.21
SHDQ96IW2 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.34■□□□□ 0.21
SHDQ96IW2 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.34■□□□□ 0.21
SHDQ96IW2 AC068587.3-201ENST00000526613 355 ntBASIC16.34■□□□□ 0.21
SHDQ96IW2 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.34■□□□□ 0.21
SHDQ96IW2 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SHDQ96IW2 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.34■□□□□ 0.21
SHDQ96IW2 AC009486.1-201ENST00000569860 813 ntBASIC16.34■□□□□ 0.21
SHDQ96IW2 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.34■□□□□ 0.21
SHDQ96IW2 AL391069.4-201ENST00000609583 481 ntBASIC16.34■□□□□ 0.21
SHDQ96IW2 AL158212.4-201ENST00000624062 1286 ntBASIC16.34■□□□□ 0.21
SHDQ96IW2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.34■□□□□ 0.21
SHDQ96IW2 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.34■□□□□ 0.21
SHDQ96IW2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHDQ96IW2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.34■□□□□ 0.21
SHDQ96IW2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.34■□□□□ 0.21
SHDQ96IW2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
SHDQ96IW2 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHDQ96IW2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
SHDQ96IW2 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHDQ96IW2 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.34■□□□□ 0.21
SHDQ96IW2 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHDQ96IW2 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHDQ96IW2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHDQ96IW2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SHDQ96IW2 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.34■□□□□ 0.21
SHDQ96IW2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.34■□□□□ 0.21
SHDQ96IW2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHDQ96IW2 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
SHDQ96IW2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
SHDQ96IW2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SHDQ96IW2 AL031731.1-201ENST00000642131 2094 ntBASIC16.33■□□□□ 0.21
SHDQ96IW2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SHDQ96IW2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SHDQ96IW2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.33■□□□□ 0.2
SHDQ96IW2 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHDQ96IW2 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHDQ96IW2 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SHDQ96IW2 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHDQ96IW2 SOCS2P1-201ENST00000417727 557 ntBASIC16.33■□□□□ 0.2
SHDQ96IW2 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.33■□□□□ 0.2
SHDQ96IW2 AC134915.1-201ENST00000426461 574 ntBASIC16.33■□□□□ 0.2
SHDQ96IW2 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SHDQ96IW2 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.33■□□□□ 0.2
SHDQ96IW2 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.33■□□□□ 0.2
SHDQ96IW2 AC007551.1-201ENST00000457394 519 ntBASIC16.33■□□□□ 0.2
SHDQ96IW2 AC099548.2-209ENST00000480264 625 ntBASIC16.33■□□□□ 0.2
SHDQ96IW2 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.33■□□□□ 0.2
SHDQ96IW2 AC108725.1-201ENST00000495472 409 ntBASIC16.33■□□□□ 0.2
SHDQ96IW2 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.33■□□□□ 0.2
SHDQ96IW2 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.33■□□□□ 0.2
SHDQ96IW2 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.33■□□□□ 0.2
SHDQ96IW2 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SHDQ96IW2 BRI3BPP1-201ENST00000594224 787 ntBASIC16.33■□□□□ 0.2
SHDQ96IW2 AC010328.2-201ENST00000597698 1111 ntBASIC16.33■□□□□ 0.2
SHDQ96IW2 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.33■□□□□ 0.2
SHDQ96IW2 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms