Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 FOXO1B-201ENST00000504678 1527 ntBASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 MIR346-201ENST00000362234 95 ntBASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 RN7SL589P-201ENST00000481268 310 ntBASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 AC024267.1-201ENST00000582320 895 ntBASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 AC105917.1-201ENST00000506637 2539 ntBASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM5Q96HC4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 AP001282.1-201ENST00000531301 1499 ntBASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 FAM58CP-201ENST00000435741 640 ntBASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 MKNK2P1-201ENST00000437526 628 ntBASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 AC243562.1-201ENST00000560672 389 ntBASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 AC061975.2-201ENST00000581722 295 ntBASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 AC027307.2-201ENST00000591252 911 ntBASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 C20orf181-201ENST00000623918 480 ntBASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
PDLIM5Q96HC4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms