Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
RNF183Q96D59 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RNF183Q96D59 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC12.19□□□□□ -0.46
RNF183Q96D59 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RNF183Q96D59 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC12.19□□□□□ -0.46
RNF183Q96D59 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RNF183Q96D59 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RNF183Q96D59 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RNF183Q96D59 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RNF183Q96D59 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RNF183Q96D59 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
RNF183Q96D59 RNU1-129P-201ENST00000384064 167 ntBASIC12.19□□□□□ -0.46
RNF183Q96D59 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC12.19□□□□□ -0.46
RNF183Q96D59 TSEN15P1-201ENST00000423257 515 ntBASIC12.19□□□□□ -0.46
RNF183Q96D59 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RNF183Q96D59 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RNF183Q96D59 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.19□□□□□ -0.46
RNF183Q96D59 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
RNF183Q96D59 U1.21-201ENST00000580816 167 ntBASIC12.19□□□□□ -0.46
RNF183Q96D59 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.19□□□□□ -0.46
RNF183Q96D59 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC12.19□□□□□ -0.46
RNF183Q96D59 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC12.19□□□□□ -0.46
RNF183Q96D59 AL031055.1-201ENST00000606362 631 ntBASIC12.19□□□□□ -0.46
RNF183Q96D59 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.19□□□□□ -0.46
RNF183Q96D59 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.19□□□□□ -0.46
RNF183Q96D59 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RNF183Q96D59 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RNF183Q96D59 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RNF183Q96D59 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RNF183Q96D59 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RNF183Q96D59 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RNF183Q96D59 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RNF183Q96D59 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
RNF183Q96D59 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RNF183Q96D59 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
RNF183Q96D59 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.19□□□□□ -0.46
RNF183Q96D59 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RNF183Q96D59 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
RNF183Q96D59 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC12.19□□□□□ -0.46
RNF183Q96D59 STK24-203ENST00000397517 4578 ntTSL 2 BASIC12.19□□□□□ -0.46
RNF183Q96D59 RHBDF1P1-201ENST00000427504 1941 ntBASIC12.19□□□□□ -0.46
RNF183Q96D59 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
RNF183Q96D59 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC12.19□□□□□ -0.46
RNF183Q96D59 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC12.19□□□□□ -0.46
RNF183Q96D59 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC12.19□□□□□ -0.46
RNF183Q96D59 CICP4-201ENST00000447359 2812 ntBASIC12.19□□□□□ -0.46
RNF183Q96D59 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RNF183Q96D59 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RNF183Q96D59 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RNF183Q96D59 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF183Q96D59 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF183Q96D59 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RNF183Q96D59 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF183Q96D59 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.18□□□□□ -0.46
RNF183Q96D59 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.18□□□□□ -0.46
RNF183Q96D59 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.18□□□□□ -0.46
RNF183Q96D59 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF183Q96D59 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF183Q96D59 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RNF183Q96D59 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
RNF183Q96D59 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC12.18□□□□□ -0.46
RNF183Q96D59 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC12.18□□□□□ -0.46
RNF183Q96D59 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.18□□□□□ -0.46
RNF183Q96D59 HARS-204ENST00000438307 1789 ntTSL 2 BASIC12.18□□□□□ -0.46
RNF183Q96D59 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RNF183Q96D59 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC12.18□□□□□ -0.46
RNF183Q96D59 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
RNF183Q96D59 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF183Q96D59 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
RNF183Q96D59 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF183Q96D59 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.18□□□□□ -0.46
RNF183Q96D59 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF183Q96D59 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF183Q96D59 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF183Q96D59 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF183Q96D59 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RNF183Q96D59 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF183Q96D59 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF183Q96D59 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RNF183Q96D59 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
RNF183Q96D59 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF183Q96D59 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC12.18□□□□□ -0.46
RNF183Q96D59 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.18□□□□□ -0.46
RNF183Q96D59 CDK2AP2P3-201ENST00000422476 372 ntBASIC12.18□□□□□ -0.46
RNF183Q96D59 AL645939.2-201ENST00000427340 991 ntBASIC12.18□□□□□ -0.46
RNF183Q96D59 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC12.18□□□□□ -0.46
RNF183Q96D59 AC005237.2-201ENST00000434368 219 ntBASIC12.18□□□□□ -0.46
RNF183Q96D59 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.18□□□□□ -0.46
RNF183Q96D59 AC023141.5-201ENST00000458585 616 ntBASIC12.18□□□□□ -0.46
RNF183Q96D59 KRT8P48-201ENST00000515599 1220 ntBASIC12.18□□□□□ -0.46
RNF183Q96D59 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.18□□□□□ -0.46
RNF183Q96D59 AL135744.1-201ENST00000565098 629 ntBASIC12.18□□□□□ -0.46
RNF183Q96D59 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.18□□□□□ -0.46
RNF183Q96D59 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
RNF183Q96D59 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC12.18□□□□□ -0.46
RNF183Q96D59 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC12.18□□□□□ -0.46
RNF183Q96D59 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
RNF183Q96D59 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF183Q96D59 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
RNF183Q96D59 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms