Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
VPS33AQ96AX1 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
VPS33AQ96AX1 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.77■□□□□ 0.12
VPS33AQ96AX1 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VPS33AQ96AX1 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VPS33AQ96AX1 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VPS33AQ96AX1 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VPS33AQ96AX1 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.77■□□□□ 0.12
VPS33AQ96AX1 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VPS33AQ96AX1 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VPS33AQ96AX1 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
VPS33AQ96AX1 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
VPS33AQ96AX1 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VPS33AQ96AX1 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
VPS33AQ96AX1 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
VPS33AQ96AX1 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VPS33AQ96AX1 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VPS33AQ96AX1 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VPS33AQ96AX1 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.77■□□□□ 0.12
VPS33AQ96AX1 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.77■□□□□ 0.12
VPS33AQ96AX1 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.77■□□□□ 0.12
VPS33AQ96AX1 FGFR3P6-201ENST00000457012 610 ntBASIC15.77■□□□□ 0.12
VPS33AQ96AX1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VPS33AQ96AX1 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.77■□□□□ 0.12
VPS33AQ96AX1 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.77■□□□□ 0.12
VPS33AQ96AX1 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.77■□□□□ 0.12
VPS33AQ96AX1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VPS33AQ96AX1 AC087641.1-201ENST00000557561 1021 ntBASIC15.77■□□□□ 0.12
VPS33AQ96AX1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.77■□□□□ 0.12
VPS33AQ96AX1 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
VPS33AQ96AX1 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.77■□□□□ 0.12
VPS33AQ96AX1 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.77■□□□□ 0.12
VPS33AQ96AX1 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.77■□□□□ 0.12
VPS33AQ96AX1 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
VPS33AQ96AX1 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VPS33AQ96AX1 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
VPS33AQ96AX1 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VPS33AQ96AX1 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
VPS33AQ96AX1 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VPS33AQ96AX1 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VPS33AQ96AX1 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VPS33AQ96AX1 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VPS33AQ96AX1 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.77■□□□□ 0.11
VPS33AQ96AX1 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VPS33AQ96AX1 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.77■□□□□ 0.11
VPS33AQ96AX1 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 AC013268.4-201ENST00000637413 2228 ntBASIC15.76■□□□□ 0.11
VPS33AQ96AX1 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 AL445228.2-201ENST00000605589 952 ntBASIC15.76■□□□□ 0.11
VPS33AQ96AX1 AL805961.1-202ENST00000641562 540 ntBASIC15.76■□□□□ 0.11
VPS33AQ96AX1 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 AC069224.1-201ENST00000566372 1715 ntBASIC15.76■□□□□ 0.11
VPS33AQ96AX1 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS33AQ96AX1 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms