Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCAMP4Q969E2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.2■□□□□ 0.18
SCAMP4Q969E2 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.2■□□□□ 0.18
SCAMP4Q969E2 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCAMP4Q969E2 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCAMP4Q969E2 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.2■□□□□ 0.18
SCAMP4Q969E2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
SCAMP4Q969E2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCAMP4Q969E2 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCAMP4Q969E2 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 KLF2P3-201ENST00000451977 1087 ntBASIC16.19■□□□□ 0.18
SCAMP4Q969E2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 AC125807.1-201ENST00000483097 614 ntBASIC16.19■□□□□ 0.18
SCAMP4Q969E2 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 AC024267.1-201ENST00000582320 895 ntBASIC16.19■□□□□ 0.18
SCAMP4Q969E2 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCAMP4Q969E2 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 AC067863.1-201ENST00000494933 530 ntBASIC16.18■□□□□ 0.18
SCAMP4Q969E2 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCAMP4Q969E2 PCDHB19P-201ENST00000570871 2371 ntBASIC16.18■□□□□ 0.18
SCAMP4Q969E2 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCAMP4Q969E2 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.17■□□□□ 0.18
SCAMP4Q969E2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SCAMP4Q969E2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCAMP4Q969E2 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.17■□□□□ 0.18
SCAMP4Q969E2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCAMP4Q969E2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCAMP4Q969E2 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms