Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
CASKIN1Q8WXD9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC24.97■■□□□ 1.59
CASKIN1Q8WXD9 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CASKIN1Q8WXD9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CASKIN1Q8WXD9 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CASKIN1Q8WXD9 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CASKIN1Q8WXD9 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC24.96■■□□□ 1.59
CASKIN1Q8WXD9 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CASKIN1Q8WXD9 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
CASKIN1Q8WXD9 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC24.96■■□□□ 1.59
CASKIN1Q8WXD9 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC24.96■■□□□ 1.59
CASKIN1Q8WXD9 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC24.96■■□□□ 1.59
CASKIN1Q8WXD9 AL162726.2-201ENST00000438986 1017 ntBASIC24.96■■□□□ 1.59
CASKIN1Q8WXD9 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC24.96■■□□□ 1.59
CASKIN1Q8WXD9 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC24.96■■□□□ 1.59
CASKIN1Q8WXD9 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC24.96■■□□□ 1.59
CASKIN1Q8WXD9 PHKG1P2-201ENST00000457537 863 ntBASIC24.96■■□□□ 1.59
CASKIN1Q8WXD9 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC24.96■■□□□ 1.59
CASKIN1Q8WXD9 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CASKIN1Q8WXD9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC24.96■■□□□ 1.59
CASKIN1Q8WXD9 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CASKIN1Q8WXD9 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
CASKIN1Q8WXD9 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC24.96■■□□□ 1.59
CASKIN1Q8WXD9 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CASKIN1Q8WXD9 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
CASKIN1Q8WXD9 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC24.96■■□□□ 1.59
CASKIN1Q8WXD9 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CASKIN1Q8WXD9 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CASKIN1Q8WXD9 INTS4P2-202ENST00000614726 2019 ntBASIC24.96■■□□□ 1.59
CASKIN1Q8WXD9 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC24.96■■□□□ 1.59
CASKIN1Q8WXD9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC24.96■■□□□ 1.59
CASKIN1Q8WXD9 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CASKIN1Q8WXD9 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
CASKIN1Q8WXD9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.59
CASKIN1Q8WXD9 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC24.95■■□□□ 1.59
CASKIN1Q8WXD9 MIR658-201ENST00000385210 100 ntBASIC24.95■■□□□ 1.59
CASKIN1Q8WXD9 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC24.95■■□□□ 1.59
CASKIN1Q8WXD9 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC24.95■■□□□ 1.59
CASKIN1Q8WXD9 MIR4259-201ENST00000584466 101 ntBASIC24.95■■□□□ 1.59
CASKIN1Q8WXD9 AL450472.2-201ENST00000603663 1156 ntBASIC24.95■■□□□ 1.59
CASKIN1Q8WXD9 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.59
CASKIN1Q8WXD9 ABBA01031660.1-201ENST00000635219 756 ntBASIC24.95■■□□□ 1.59
CASKIN1Q8WXD9 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.59
CASKIN1Q8WXD9 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CASKIN1Q8WXD9 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
CASKIN1Q8WXD9 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
CASKIN1Q8WXD9 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
CASKIN1Q8WXD9 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC24.95■■□□□ 1.58
CASKIN1Q8WXD9 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CASKIN1Q8WXD9 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CASKIN1Q8WXD9 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC24.95■■□□□ 1.58
CASKIN1Q8WXD9 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
CASKIN1Q8WXD9 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC24.95■■□□□ 1.58
CASKIN1Q8WXD9 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC24.95■■□□□ 1.58
CASKIN1Q8WXD9 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC24.95■■□□□ 1.58
CASKIN1Q8WXD9 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CASKIN1Q8WXD9 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CASKIN1Q8WXD9 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC24.95■■□□□ 1.58
CASKIN1Q8WXD9 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC24.95■■□□□ 1.58
CASKIN1Q8WXD9 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC24.95■■□□□ 1.58
CASKIN1Q8WXD9 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CASKIN1Q8WXD9 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC24.94■■□□□ 1.58
CASKIN1Q8WXD9 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC24.94■■□□□ 1.58
CASKIN1Q8WXD9 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CASKIN1Q8WXD9 AC011676.5-201ENST00000624864 2660 ntBASIC24.94■■□□□ 1.58
CASKIN1Q8WXD9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CASKIN1Q8WXD9 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CASKIN1Q8WXD9 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CASKIN1Q8WXD9 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CASKIN1Q8WXD9 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
CASKIN1Q8WXD9 HNRNPA1P13-201ENST00000510646 963 ntBASIC24.94■■□□□ 1.58
CASKIN1Q8WXD9 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC24.94■■□□□ 1.58
CASKIN1Q8WXD9 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC24.94■■□□□ 1.58
CASKIN1Q8WXD9 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC24.94■■□□□ 1.58
CASKIN1Q8WXD9 WNT11-204ENST00000621122 789 ntTSL 5 BASIC24.94■■□□□ 1.58
CASKIN1Q8WXD9 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
CASKIN1Q8WXD9 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CASKIN1Q8WXD9 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC24.93■■□□□ 1.58
CASKIN1Q8WXD9 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
CASKIN1Q8WXD9 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC24.93■■□□□ 1.58
CASKIN1Q8WXD9 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
CASKIN1Q8WXD9 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CASKIN1Q8WXD9 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CASKIN1Q8WXD9 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CASKIN1Q8WXD9 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
CASKIN1Q8WXD9 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CASKIN1Q8WXD9 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CASKIN1Q8WXD9 AC006449.6-201ENST00000612330 2296 ntBASIC24.93■■□□□ 1.58
CASKIN1Q8WXD9 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
CASKIN1Q8WXD9 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CASKIN1Q8WXD9 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC24.93■■□□□ 1.58
CASKIN1Q8WXD9 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC24.93■■□□□ 1.58
CASKIN1Q8WXD9 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CASKIN1Q8WXD9 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC24.93■■□□□ 1.58
CASKIN1Q8WXD9 RPS2P32-201ENST00000439199 892 ntBASIC24.93■■□□□ 1.58
CASKIN1Q8WXD9 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC24.93■■□□□ 1.58
CASKIN1Q8WXD9 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC24.93■■□□□ 1.58
CASKIN1Q8WXD9 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC24.93■■□□□ 1.58
CASKIN1Q8WXD9 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC24.93■■□□□ 1.58
CASKIN1Q8WXD9 CROCCP4-201ENST00000457096 498 ntBASIC24.93■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms