Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CT55Q8WUE5 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.13■□□□□ 0.01
CT55Q8WUE5 IGHV3-71-201ENST00000523324 359 ntBASIC15.13■□□□□ 0.01
CT55Q8WUE5 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.13■□□□□ 0.01
CT55Q8WUE5 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.13■□□□□ 0.01
CT55Q8WUE5 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.13■□□□□ 0.01
CT55Q8WUE5 HILS1-202ENST00000545329 423 ntBASIC15.13■□□□□ 0.01
CT55Q8WUE5 AC123567.1-201ENST00000548294 1261 ntBASIC15.13■□□□□ 0.01
CT55Q8WUE5 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.13■□□□□ 0.01
CT55Q8WUE5 AC074044.1-201ENST00000609673 707 ntBASIC15.13■□□□□ 0.01
CT55Q8WUE5 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CT55Q8WUE5 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CT55Q8WUE5 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CT55Q8WUE5 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.13■□□□□ 0.01
CT55Q8WUE5 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CT55Q8WUE5 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CT55Q8WUE5 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CT55Q8WUE5 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CT55Q8WUE5 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CT55Q8WUE5 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CT55Q8WUE5 RNF216P1-203ENST00000404404 2427 ntBASIC15.13■□□□□ 0.01
CT55Q8WUE5 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.13■□□□□ 0.01
CT55Q8WUE5 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CT55Q8WUE5 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CT55Q8WUE5 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CT55Q8WUE5 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.13■□□□□ 0.01
CT55Q8WUE5 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CT55Q8WUE5 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.12■□□□□ 0.01
CT55Q8WUE5 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CT55Q8WUE5 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CT55Q8WUE5 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.12■□□□□ 0.01
CT55Q8WUE5 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CT55Q8WUE5 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
CT55Q8WUE5 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.12■□□□□ 0.01
CT55Q8WUE5 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CT55Q8WUE5 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CT55Q8WUE5 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CT55Q8WUE5 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CT55Q8WUE5 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CT55Q8WUE5 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CT55Q8WUE5 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
CT55Q8WUE5 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.12■□□□□ 0.01
CT55Q8WUE5 HIST3H2BA-201ENST00000436555 524 ntBASIC15.12■□□□□ 0.01
CT55Q8WUE5 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.12■□□□□ 0.01
CT55Q8WUE5 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.12■□□□□ 0.01
CT55Q8WUE5 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.12■□□□□ 0.01
CT55Q8WUE5 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.12■□□□□ 0.01
CT55Q8WUE5 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CT55Q8WUE5 AC025048.3-201ENST00000590609 569 ntBASIC15.12■□□□□ 0.01
CT55Q8WUE5 AC099568.2-201ENST00000609194 695 ntBASIC15.12■□□□□ 0.01
CT55Q8WUE5 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.12■□□□□ 0.01
CT55Q8WUE5 AC005702.4-201ENST00000618393 416 ntBASIC15.12■□□□□ 0.01
CT55Q8WUE5 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CT55Q8WUE5 AC078925.2-201ENST00000624013 1973 ntBASIC15.12■□□□□ 0.01
CT55Q8WUE5 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CT55Q8WUE5 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CT55Q8WUE5 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CT55Q8WUE5 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CT55Q8WUE5 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.12■□□□□ 0.01
CT55Q8WUE5 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CT55Q8WUE5 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CT55Q8WUE5 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CT55Q8WUE5 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.11■□□□□ 0.01
CT55Q8WUE5 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
CT55Q8WUE5 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.11■□□□□ 0.01
CT55Q8WUE5 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.11■□□□□ 0.01
CT55Q8WUE5 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.11■□□□□ 0.01
CT55Q8WUE5 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CT55Q8WUE5 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CT55Q8WUE5 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
CT55Q8WUE5 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CT55Q8WUE5 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CT55Q8WUE5 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.11■□□□□ 0.01
CT55Q8WUE5 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CT55Q8WUE5 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CT55Q8WUE5 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CT55Q8WUE5 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CT55Q8WUE5 FO393414.2-201ENST00000405153 598 ntBASIC15.11■□□□□ 0.01
CT55Q8WUE5 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.11■□□□□ 0.01
CT55Q8WUE5 ELK1P1-201ENST00000485699 580 ntBASIC15.11■□□□□ 0.01
CT55Q8WUE5 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CT55Q8WUE5 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CT55Q8WUE5 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CT55Q8WUE5 AC092337.1-201ENST00000568699 1129 ntBASIC15.11■□□□□ 0.01
CT55Q8WUE5 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CT55Q8WUE5 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.11■□□□□ 0.01
CT55Q8WUE5 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.11■□□□□ 0.01
CT55Q8WUE5 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.11■□□□□ 0.01
CT55Q8WUE5 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.11■□□□□ 0.01
CT55Q8WUE5 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CT55Q8WUE5 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CT55Q8WUE5 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CT55Q8WUE5 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CT55Q8WUE5 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.11■□□□□ 0.01
CT55Q8WUE5 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CT55Q8WUE5 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CT55Q8WUE5 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CT55Q8WUE5 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CT55Q8WUE5 PCDHB18P-201ENST00000524813 2368 ntBASIC15.11■□□□□ 0.01
CT55Q8WUE5 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms