Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNED1Q8TER0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNED1Q8TER0 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
SNED1Q8TER0 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SNED1Q8TER0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
SNED1Q8TER0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNED1Q8TER0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNED1Q8TER0 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
SNED1Q8TER0 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC19.58■□□□□ 0.73
SNED1Q8TER0 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNED1Q8TER0 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNED1Q8TER0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.58■□□□□ 0.72
SNED1Q8TER0 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SNED1Q8TER0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNED1Q8TER0 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNED1Q8TER0 AC245100.5-201ENST00000452108 331 ntBASIC19.58■□□□□ 0.72
SNED1Q8TER0 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC19.58■□□□□ 0.72
SNED1Q8TER0 TPI1-206ENST00000488464 791 ntTSL 5 BASIC19.58■□□□□ 0.72
SNED1Q8TER0 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC19.58■□□□□ 0.72
SNED1Q8TER0 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNED1Q8TER0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.58■□□□□ 0.72
SNED1Q8TER0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SNED1Q8TER0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.58■□□□□ 0.72
SNED1Q8TER0 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.58■□□□□ 0.72
SNED1Q8TER0 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.58■□□□□ 0.72
SNED1Q8TER0 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNED1Q8TER0 AL691432.1-201ENST00000596308 1422 ntBASIC19.57■□□□□ 0.72
SNED1Q8TER0 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
SNED1Q8TER0 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNED1Q8TER0 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
SNED1Q8TER0 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNED1Q8TER0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.57■□□□□ 0.72
SNED1Q8TER0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNED1Q8TER0 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNED1Q8TER0 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNED1Q8TER0 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNED1Q8TER0 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC19.57■□□□□ 0.72
SNED1Q8TER0 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.57■□□□□ 0.72
SNED1Q8TER0 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC19.57■□□□□ 0.72
SNED1Q8TER0 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC19.57■□□□□ 0.72
SNED1Q8TER0 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC19.57■□□□□ 0.72
SNED1Q8TER0 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC19.57■□□□□ 0.72
SNED1Q8TER0 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC19.57■□□□□ 0.72
SNED1Q8TER0 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC19.57■□□□□ 0.72
SNED1Q8TER0 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19.57■□□□□ 0.72
SNED1Q8TER0 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNED1Q8TER0 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNED1Q8TER0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SNED1Q8TER0 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNED1Q8TER0 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNED1Q8TER0 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC19.57■□□□□ 0.72
SNED1Q8TER0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
SNED1Q8TER0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNED1Q8TER0 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNED1Q8TER0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNED1Q8TER0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNED1Q8TER0 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNED1Q8TER0 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNED1Q8TER0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNED1Q8TER0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.56■□□□□ 0.72
SNED1Q8TER0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNED1Q8TER0 AC005622.1-201ENST00000636801 1703 ntBASIC19.56■□□□□ 0.72
SNED1Q8TER0 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNED1Q8TER0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SNED1Q8TER0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNED1Q8TER0 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNED1Q8TER0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNED1Q8TER0 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC19.56■□□□□ 0.72
SNED1Q8TER0 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SNED1Q8TER0 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNED1Q8TER0 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNED1Q8TER0 PKIG-203ENST00000372887 769 ntTSL 3 BASIC19.56■□□□□ 0.72
SNED1Q8TER0 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNED1Q8TER0 FAM21FP-201ENST00000426241 1131 ntBASIC19.56■□□□□ 0.72
SNED1Q8TER0 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC19.56■□□□□ 0.72
SNED1Q8TER0 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC19.56■□□□□ 0.72
SNED1Q8TER0 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.56■□□□□ 0.72
SNED1Q8TER0 AGER-214ENST00000538695 487 ntTSL 2 BASIC19.56■□□□□ 0.72
SNED1Q8TER0 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC19.56■□□□□ 0.72
SNED1Q8TER0 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC19.56■□□□□ 0.72
SNED1Q8TER0 DUX4L45-201ENST00000566406 1057 ntBASIC19.56■□□□□ 0.72
SNED1Q8TER0 AC120045.2-201ENST00000567334 178 ntBASIC19.56■□□□□ 0.72
SNED1Q8TER0 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC19.56■□□□□ 0.72
SNED1Q8TER0 AC244669.2-201ENST00000612320 853 ntBASIC19.56■□□□□ 0.72
SNED1Q8TER0 AC009542.2-202ENST00000619004 1067 ntBASIC19.56■□□□□ 0.72
SNED1Q8TER0 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNED1Q8TER0 AC005252.2-201ENST00000624630 1141 ntBASIC19.56■□□□□ 0.72
SNED1Q8TER0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
SNED1Q8TER0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SNED1Q8TER0 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SNED1Q8TER0 AC078925.2-201ENST00000624013 1973 ntBASIC19.56■□□□□ 0.72
SNED1Q8TER0 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNED1Q8TER0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SNED1Q8TER0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SNED1Q8TER0 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.56■□□□□ 0.72
SNED1Q8TER0 AC105020.1-201ENST00000435356 2205 ntBASIC19.55■□□□□ 0.72
SNED1Q8TER0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.55■□□□□ 0.72
SNED1Q8TER0 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SNED1Q8TER0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.55■□□□□ 0.72
SNED1Q8TER0 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms