Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 AC092933.1-201ENST00000393644 945 ntBASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 AC245100.5-201ENST00000452108 331 ntBASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 AC068587.3-201ENST00000526613 355 ntBASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 AC020907.1-201ENST00000616460 1350 ntBASIC17.79■□□□□ 0.44
KLHDC9Q8NEP7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 PTP4A1P2-201ENST00000546033 454 ntBASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.78■□□□□ 0.44
KLHDC9Q8NEP7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KLHDC9Q8NEP7 AL592424.1-201ENST00000563624 1536 ntBASIC17.77■□□□□ 0.44
KLHDC9Q8NEP7 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.77■□□□□ 0.44
KLHDC9Q8NEP7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.77■□□□□ 0.44
KLHDC9Q8NEP7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KLHDC9Q8NEP7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KLHDC9Q8NEP7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
KLHDC9Q8NEP7 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.77■□□□□ 0.44
KLHDC9Q8NEP7 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KLHDC9Q8NEP7 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.77■□□□□ 0.44
KLHDC9Q8NEP7 AC134915.1-201ENST00000426461 574 ntBASIC17.77■□□□□ 0.44
KLHDC9Q8NEP7 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.77■□□□□ 0.44
KLHDC9Q8NEP7 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KLHDC9Q8NEP7 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KLHDC9Q8NEP7 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.77■□□□□ 0.44
KLHDC9Q8NEP7 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.77■□□□□ 0.44
KLHDC9Q8NEP7 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.77■□□□□ 0.44
KLHDC9Q8NEP7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.77■□□□□ 0.44
KLHDC9Q8NEP7 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.77■□□□□ 0.44
KLHDC9Q8NEP7 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.77■□□□□ 0.44
KLHDC9Q8NEP7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.77■□□□□ 0.44
KLHDC9Q8NEP7 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.77■□□□□ 0.44
KLHDC9Q8NEP7 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
KLHDC9Q8NEP7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
KLHDC9Q8NEP7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms