Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 AL365330.1-201ENST00000607459 531 ntBASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 HTR5BP-201ENST00000430851 1154 ntBASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 ADH5P3-201ENST00000433842 1137 ntBASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 AC105233.2-201ENST00000523697 349 ntBASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 AF228730.5-201ENST00000530288 346 ntBASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 AL138918.1-201ENST00000568306 659 ntBASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM35BQ8NCS4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 DNAJB3-201ENST00000446806 729 ntBASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 AC026120.1-201ENST00000611536 926 ntBASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 AC008267.7-201ENST00000624570 1194 ntBASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
TMEM35BQ8NCS4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TMEM35BQ8NCS4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM35BQ8NCS4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM35BQ8NCS4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM35BQ8NCS4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM35BQ8NCS4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM35BQ8NCS4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM35BQ8NCS4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms