Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 AC022494.1-201ENST00000466044 728 ntBASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 RRP7BP-205ENST00000566851 833 ntBASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 MIR1909-201ENST00000411312 80 ntBASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 AC112492.5-201ENST00000421897 457 ntBASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 MYCLP2-201ENST00000449268 967 ntBASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 WASH4P-201ENST00000564273 1246 ntBASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SYNPOQ8N3V7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPOQ8N3V7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPOQ8N3V7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPOQ8N3V7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPOQ8N3V7 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPOQ8N3V7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
SYNPOQ8N3V7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPOQ8N3V7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPOQ8N3V7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPOQ8N3V7 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
SYNPOQ8N3V7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.52■□□□□ 0.24
SYNPOQ8N3V7 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.52■□□□□ 0.24
SYNPOQ8N3V7 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPOQ8N3V7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPOQ8N3V7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPOQ8N3V7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPOQ8N3V7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPOQ8N3V7 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPOQ8N3V7 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPOQ8N3V7 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.52■□□□□ 0.24
SYNPOQ8N3V7 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.52■□□□□ 0.24
SYNPOQ8N3V7 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.52■□□□□ 0.24
SYNPOQ8N3V7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPOQ8N3V7 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.52■□□□□ 0.24
SYNPOQ8N3V7 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.52■□□□□ 0.24
SYNPOQ8N3V7 AC004790.1-201ENST00000612686 536 ntBASIC16.52■□□□□ 0.24
SYNPOQ8N3V7 AC004461.2-201ENST00000629517 803 ntBASIC16.52■□□□□ 0.24
SYNPOQ8N3V7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
SYNPOQ8N3V7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.52■□□□□ 0.24
SYNPOQ8N3V7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms