Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
COL27A1Q8IZC6 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
COL27A1Q8IZC6 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.08■□□□□ 0
COL27A1Q8IZC6 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.08■□□□□ 0
COL27A1Q8IZC6 RN7SL560P-201ENST00000577943 264 ntBASIC15.08■□□□□ 0
COL27A1Q8IZC6 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.08■□□□□ 0
COL27A1Q8IZC6 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
COL27A1Q8IZC6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
COL27A1Q8IZC6 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL27A1Q8IZC6 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL27A1Q8IZC6 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
COL27A1Q8IZC6 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.07■□□□□ 0
COL27A1Q8IZC6 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.07■□□□□ 0
COL27A1Q8IZC6 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
COL27A1Q8IZC6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.07■□□□□ 0
COL27A1Q8IZC6 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.07■□□□□ 0
COL27A1Q8IZC6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL27A1Q8IZC6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.07■□□□□ 0
COL27A1Q8IZC6 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
COL27A1Q8IZC6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
COL27A1Q8IZC6 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL27A1Q8IZC6 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.07■□□□□ 0
COL27A1Q8IZC6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL27A1Q8IZC6 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL27A1Q8IZC6 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
COL27A1Q8IZC6 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL27A1Q8IZC6 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.07■□□□□ 0
COL27A1Q8IZC6 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.07■□□□□ 0
COL27A1Q8IZC6 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.07■□□□□ 0
COL27A1Q8IZC6 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.07■□□□□ 0
COL27A1Q8IZC6 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.07■□□□□ 0
COL27A1Q8IZC6 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.07■□□□□ 0
COL27A1Q8IZC6 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.07■□□□□ 0
COL27A1Q8IZC6 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.07■□□□□ 0
COL27A1Q8IZC6 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
COL27A1Q8IZC6 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
COL27A1Q8IZC6 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL27A1Q8IZC6 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
COL27A1Q8IZC6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.07■□□□□ 0
COL27A1Q8IZC6 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
COL27A1Q8IZC6 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL27A1Q8IZC6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.07■□□□□ 0
COL27A1Q8IZC6 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
COL27A1Q8IZC6 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.07■□□□□ 0
COL27A1Q8IZC6 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.07■□□□□ 0
COL27A1Q8IZC6 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
COL27A1Q8IZC6 AP001282.1-201ENST00000531301 1499 ntBASIC15.07■□□□□ 0
COL27A1Q8IZC6 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.06■□□□□ 0
COL27A1Q8IZC6 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.06■□□□□ 0
COL27A1Q8IZC6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.06■□□□□ 0
COL27A1Q8IZC6 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.06■□□□□ 0
COL27A1Q8IZC6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
COL27A1Q8IZC6 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.06■□□□□ 0
COL27A1Q8IZC6 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL27A1Q8IZC6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
COL27A1Q8IZC6 AC018470.1-201ENST00000624790 3129 ntBASIC15.06■□□□□ 0
COL27A1Q8IZC6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL27A1Q8IZC6 BRWD1P1-201ENST00000401091 371 ntBASIC15.06■□□□□ 0
COL27A1Q8IZC6 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
COL27A1Q8IZC6 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.06■□□□□ 0
COL27A1Q8IZC6 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
COL27A1Q8IZC6 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.06■□□□□ 0
COL27A1Q8IZC6 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.06■□□□□ 0
COL27A1Q8IZC6 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.06■□□□□ 0
COL27A1Q8IZC6 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.06■□□□□ 0
COL27A1Q8IZC6 AC015910.1-201ENST00000579400 975 ntBASIC15.06■□□□□ 0
COL27A1Q8IZC6 RN7SL219P-201ENST00000582872 296 ntBASIC15.06■□□□□ 0
COL27A1Q8IZC6 AC243960.2-201ENST00000600996 747 ntBASIC15.06■□□□□ 0
COL27A1Q8IZC6 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
COL27A1Q8IZC6 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
COL27A1Q8IZC6 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
COL27A1Q8IZC6 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL27A1Q8IZC6 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.06■□□□□ 0
COL27A1Q8IZC6 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
COL27A1Q8IZC6 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
COL27A1Q8IZC6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC15.06■□□□□ 0
COL27A1Q8IZC6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.06■□□□□ 0
COL27A1Q8IZC6 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
COL27A1Q8IZC6 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
COL27A1Q8IZC6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL27A1Q8IZC6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
COL27A1Q8IZC6 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
COL27A1Q8IZC6 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.06■□□□□ 0
COL27A1Q8IZC6 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.06■□□□□ 0
COL27A1Q8IZC6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL27A1Q8IZC6 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL27A1Q8IZC6 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.06■□□□□ 0
COL27A1Q8IZC6 C1QBPP1-201ENST00000400117 770 ntBASIC15.06■□□□□ 0
COL27A1Q8IZC6 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.06■□□□□ 0
COL27A1Q8IZC6 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.06■□□□□ 0
COL27A1Q8IZC6 AC007551.1-201ENST00000457394 519 ntBASIC15.06■□□□□ 0
COL27A1Q8IZC6 RPL13AP25-201ENST00000484130 612 ntBASIC15.06■□□□□ 0
COL27A1Q8IZC6 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.06■□□□□ 0
COL27A1Q8IZC6 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
COL27A1Q8IZC6 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.06■□□□□ 0
COL27A1Q8IZC6 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL27A1Q8IZC6 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.06■□□□□ 0
COL27A1Q8IZC6 AL450472.2-201ENST00000603663 1156 ntBASIC15.06■□□□□ 0
COL27A1Q8IZC6 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.05■□□□□ 0
COL27A1Q8IZC6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms