Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 WASH6P-202ENST00000359512 1437 ntBASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 PGAM5P1-201ENST00000518923 814 ntBASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 AC005786.4-201ENST00000623369 682 ntBASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 U82695.1-201ENST00000635752 1889 ntBASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.44■□□□□ 0.06
CCDC116Q8IYX3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 AP000347.1-202ENST00000435868 847 ntBASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 AL671883.3-201ENST00000603274 991 ntBASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 AC008894.3-201ENST00000624324 3103 ntBASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 AL592424.1-201ENST00000563624 1536 ntBASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 PMS2P7-201ENST00000506558 1336 ntBASIC15.43■□□□□ 0.06
CCDC116Q8IYX3 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC116Q8IYX3 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms