Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 AL596087.1-201ENST00000400979 1969 ntBASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 FAM8A3P-201ENST00000427218 844 ntBASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 AC027612.4-201ENST00000605371 583 ntBASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 LINC02199-201ENST00000506655 2702 ntBASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
SCUBE3Q8IX30 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 KRT18P32-201ENST00000424695 1287 ntBASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 AC239800.4-201ENST00000603712 296 ntBASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 CYP2T1P-202ENST00000641596 2535 ntBASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCUBE3Q8IX30 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.16■□□□□ 0.34
SCUBE3Q8IX30 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.16■□□□□ 0.34
SCUBE3Q8IX30 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SCUBE3Q8IX30 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.16■□□□□ 0.34
SCUBE3Q8IX30 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCUBE3Q8IX30 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.16■□□□□ 0.34
SCUBE3Q8IX30 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.16■□□□□ 0.34
SCUBE3Q8IX30 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms