Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
UBR1Q8IWV7 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC22.72■■□□□ 1.23
UBR1Q8IWV7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC22.72■■□□□ 1.23
UBR1Q8IWV7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
UBR1Q8IWV7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC22.72■■□□□ 1.23
UBR1Q8IWV7 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC22.72■■□□□ 1.23
UBR1Q8IWV7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC22.71■■□□□ 1.23
UBR1Q8IWV7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC22.71■■□□□ 1.23
UBR1Q8IWV7 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
UBR1Q8IWV7 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC22.71■■□□□ 1.23
UBR1Q8IWV7 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
UBR1Q8IWV7 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
UBR1Q8IWV7 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
UBR1Q8IWV7 MIR1202-201ENST00000408529 83 ntBASIC22.71■■□□□ 1.23
UBR1Q8IWV7 HSPB1P2-201ENST00000448722 546 ntBASIC22.71■■□□□ 1.23
UBR1Q8IWV7 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC22.71■■□□□ 1.23
UBR1Q8IWV7 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
UBR1Q8IWV7 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC22.71■■□□□ 1.23
UBR1Q8IWV7 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
UBR1Q8IWV7 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC22.71■■□□□ 1.23
UBR1Q8IWV7 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC22.71■■□□□ 1.23
UBR1Q8IWV7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC22.71■■□□□ 1.23
UBR1Q8IWV7 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
UBR1Q8IWV7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
UBR1Q8IWV7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
UBR1Q8IWV7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
UBR1Q8IWV7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC22.71■■□□□ 1.23
UBR1Q8IWV7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
UBR1Q8IWV7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
UBR1Q8IWV7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
UBR1Q8IWV7 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
UBR1Q8IWV7 UPF3AP2-201ENST00000457924 1132 ntBASIC22.71■■□□□ 1.23
UBR1Q8IWV7 TSACC-208ENST00000481479 741 ntTSL 2 BASIC22.71■■□□□ 1.23
UBR1Q8IWV7 AC093813.1-201ENST00000605066 256 ntBASIC22.71■■□□□ 1.23
UBR1Q8IWV7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
UBR1Q8IWV7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
UBR1Q8IWV7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC22.71■■□□□ 1.23
UBR1Q8IWV7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
UBR1Q8IWV7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
UBR1Q8IWV7 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC22.7■■□□□ 1.22
UBR1Q8IWV7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
UBR1Q8IWV7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
UBR1Q8IWV7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
UBR1Q8IWV7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
UBR1Q8IWV7 BX284668.4-201ENST00000453917 508 ntBASIC22.7■■□□□ 1.22
UBR1Q8IWV7 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
UBR1Q8IWV7 AC097359.3-201ENST00000603982 1210 ntBASIC22.7■■□□□ 1.22
UBR1Q8IWV7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC22.7■■□□□ 1.22
UBR1Q8IWV7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
UBR1Q8IWV7 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
UBR1Q8IWV7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC22.7■■□□□ 1.22
UBR1Q8IWV7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC22.7■■□□□ 1.22
UBR1Q8IWV7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
UBR1Q8IWV7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC22.7■■□□□ 1.22
UBR1Q8IWV7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
UBR1Q8IWV7 AHCYP2-201ENST00000430630 1300 ntBASIC22.7■■□□□ 1.22
UBR1Q8IWV7 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC22.7■■□□□ 1.22
UBR1Q8IWV7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
UBR1Q8IWV7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
UBR1Q8IWV7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
UBR1Q8IWV7 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
UBR1Q8IWV7 RNU1-114P-201ENST00000365297 166 ntBASIC22.69■■□□□ 1.22
UBR1Q8IWV7 GGCT-203ENST00000409144 836 ntTSL 2 BASIC22.69■■□□□ 1.22
UBR1Q8IWV7 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
UBR1Q8IWV7 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
UBR1Q8IWV7 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC22.69■■□□□ 1.22
UBR1Q8IWV7 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
UBR1Q8IWV7 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC22.69■■□□□ 1.22
UBR1Q8IWV7 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC22.69■■□□□ 1.22
UBR1Q8IWV7 AC097724.1-201ENST00000609581 426 ntBASIC22.69■■□□□ 1.22
UBR1Q8IWV7 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC22.69■■□□□ 1.22
UBR1Q8IWV7 MIR6727-201ENST00000620702 65 ntBASIC22.69■■□□□ 1.22
UBR1Q8IWV7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
UBR1Q8IWV7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
UBR1Q8IWV7 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC22.69■■□□□ 1.22
UBR1Q8IWV7 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
UBR1Q8IWV7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
UBR1Q8IWV7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC22.69■■□□□ 1.22
UBR1Q8IWV7 PCDHB18P-201ENST00000524813 2368 ntBASIC22.69■■□□□ 1.22
UBR1Q8IWV7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC22.69■■□□□ 1.22
UBR1Q8IWV7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
UBR1Q8IWV7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
UBR1Q8IWV7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
UBR1Q8IWV7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
UBR1Q8IWV7 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
UBR1Q8IWV7 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC22.68■■□□□ 1.22
UBR1Q8IWV7 KSR1-207ENST00000578981 748 ntTSL 4 BASIC22.68■■□□□ 1.22
UBR1Q8IWV7 MIR3619-201ENST00000579667 83 ntBASIC22.68■■□□□ 1.22
UBR1Q8IWV7 AC020914.3-201ENST00000594712 304 ntBASIC22.68■■□□□ 1.22
UBR1Q8IWV7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC22.68■■□□□ 1.22
UBR1Q8IWV7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC22.68■■□□□ 1.22
UBR1Q8IWV7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
UBR1Q8IWV7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
UBR1Q8IWV7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
UBR1Q8IWV7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
UBR1Q8IWV7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC22.68■■□□□ 1.22
UBR1Q8IWV7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
UBR1Q8IWV7 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC22.68■■□□□ 1.22
UBR1Q8IWV7 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
UBR1Q8IWV7 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms