Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 MIR3197-201ENST00000582241 73 ntBASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 LINC02084-201ENST00000606069 1096 ntBASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 AL138828.2-201ENST00000615812 383 ntBASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.21■□□□□ 0.34
SCN4BQ8IWT1 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.21■□□□□ 0.34
SCN4BQ8IWT1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SCN4BQ8IWT1 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 AC241585.1-201ENST00000433527 519 ntBASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 MIR4745-201ENST00000577608 62 ntBASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 AL589739.1-201ENST00000607720 493 ntBASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 AJ011932.1-201ENST00000621707 465 ntBASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 AGGF1P2-201ENST00000426656 2106 ntBASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCN4BQ8IWT1 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 ALOX12P2-203ENST00000570921 1945 ntBASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 PCDHA12-202ENST00000613593 2588 ntBASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 U82695.1-201ENST00000635752 1889 ntBASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 CETN4P-206ENST00000642099 2168 ntBASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms