Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AC068472.1-201ENST00000474589 881 ntBASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 AL049637.2-201ENST00000641778 930 ntBASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 MROH4P-201ENST00000431302 1578 ntBASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 AC103564.2-201ENST00000432853 1299 ntBASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 RBM17P1-201ENST00000453646 1190 ntBASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 AP003071.4-201ENST00000562276 1284 ntBASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 AC233702.5-201ENST00000584107 538 ntBASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CROCCP3Q8IVE0 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 LINC00895-201ENST00000629028 1637 ntBASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
CROCCP3Q8IVE0 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms