Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 HYMAI-201ENST00000635591 3347 ntBASIC11.17□□□□□ -0.62
CSMD3Q7Z407 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 AL390961.4-201ENST00000623958 2535 ntBASIC11.17□□□□□ -0.62
CSMD3Q7Z407 AC068880.1-201ENST00000507289 2297 ntBASIC11.17□□□□□ -0.62
CSMD3Q7Z407 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 AL627389.1-201ENST00000413508 1182 ntBASIC11.17□□□□□ -0.62
CSMD3Q7Z407 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 AL139010.1-201ENST00000454878 894 ntBASIC11.17□□□□□ -0.62
CSMD3Q7Z407 PTP4A1P2-201ENST00000546033 454 ntBASIC11.17□□□□□ -0.62
CSMD3Q7Z407 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 HADH-212ENST00000638621 741 ntTSL 5 BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 AC011676.5-201ENST00000624864 2660 ntBASIC11.17□□□□□ -0.62
CSMD3Q7Z407 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 AC106760.1-201ENST00000508690 800 ntBASIC11.17□□□□□ -0.62
CSMD3Q7Z407 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 AP001889.1-201ENST00000525414 633 ntBASIC11.17□□□□□ -0.62
CSMD3Q7Z407 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 U82695.1-201ENST00000635752 1889 ntBASIC11.16□□□□□ -0.62
CSMD3Q7Z407 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 AC026471.1-201ENST00000564629 3026 ntBASIC11.16□□□□□ -0.62
CSMD3Q7Z407 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 LINC02012-201ENST00000608206 1725 ntBASIC11.16□□□□□ -0.62
CSMD3Q7Z407 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 AL355334.1-201ENST00000417713 215 ntBASIC11.16□□□□□ -0.62
CSMD3Q7Z407 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
CSMD3Q7Z407 HIST2H2BC-201ENST00000498492 580 ntBASIC11.16□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms