Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA1AQ71U36 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 AP005117.1-202ENST00000581724 1908 ntBASIC15.17■□□□□ 0.02
TUBA1AQ71U36 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 CICP4-201ENST00000447359 2812 ntBASIC15.17■□□□□ 0.02
TUBA1AQ71U36 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 MIR7706-201ENST00000613747 67 ntBASIC15.17■□□□□ 0.02
TUBA1AQ71U36 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 FAM215A-202ENST00000632077 792 ntBASIC15.17■□□□□ 0.02
TUBA1AQ71U36 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 FRMD8P1-201ENST00000440433 1524 ntBASIC15.17■□□□□ 0.02
TUBA1AQ71U36 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TUBA1AQ71U36 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 AC012640.2-201ENST00000561606 901 ntBASIC15.16■□□□□ 0.02
TUBA1AQ71U36 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 AP001005.1-201ENST00000571755 1248 ntBASIC15.16■□□□□ 0.02
TUBA1AQ71U36 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 HLA-A-201ENST00000376802 1334 ntBASIC15.16■□□□□ 0.02
TUBA1AQ71U36 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA1AQ71U36 AL009178.2-201ENST00000597278 2719 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms