Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 MED15P5-201ENST00000423150 992 ntBASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 AC144831.1-201ENST00000573312 2656 ntBASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NHLRC1Q6VVB1 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 AP000347.1-202ENST00000435868 847 ntBASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 RNA5SP416-201ENST00000516838 111 ntBASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NHLRC1Q6VVB1 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NHLRC1Q6VVB1 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NHLRC1Q6VVB1 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.71□□□□□ -0.05
NHLRC1Q6VVB1 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
NHLRC1Q6VVB1 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NHLRC1Q6VVB1 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
NHLRC1Q6VVB1 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
NHLRC1Q6VVB1 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.71□□□□□ -0.05
NHLRC1Q6VVB1 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NHLRC1Q6VVB1 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
NHLRC1Q6VVB1 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NHLRC1Q6VVB1 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NHLRC1Q6VVB1 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
NHLRC1Q6VVB1 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NHLRC1Q6VVB1 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.71□□□□□ -0.05
NHLRC1Q6VVB1 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.71□□□□□ -0.05
NHLRC1Q6VVB1 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.71□□□□□ -0.05
NHLRC1Q6VVB1 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
NHLRC1Q6VVB1 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
NHLRC1Q6VVB1 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NHLRC1Q6VVB1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NHLRC1Q6VVB1 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.71□□□□□ -0.05
NHLRC1Q6VVB1 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NHLRC1Q6VVB1 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
NHLRC1Q6VVB1 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.71□□□□□ -0.05
NHLRC1Q6VVB1 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms