Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 GPS2P2-201ENST00000430745 888 ntBASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 KRT8P23-201ENST00000560090 1207 ntBASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 AP000842.3-202ENST00000569238 1080 ntBASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 HLA-A-202ENST00000376806 1854 ntBASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 GGT4P-201ENST00000623672 1708 ntBASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 RBPMS2P1-201ENST00000437762 623 ntBASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 AC106028.4-201ENST00000614509 607 ntBASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 AC105917.1-201ENST00000506637 2539 ntBASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.06■□□□□ 0.32
RFWD3Q6PCD5 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 GPAA1P2-202ENST00000606848 1787 ntBASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 AC022188.1-201ENST00000620960 1664 ntBASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 MIR346-201ENST00000362234 95 ntBASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 AL645939.2-201ENST00000427340 991 ntBASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.05■□□□□ 0.32
RFWD3Q6PCD5 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms