Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LPCAT4Q643R3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
LPCAT4Q643R3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LPCAT4Q643R3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.47■□□□□ 0.07
LPCAT4Q643R3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.47■□□□□ 0.07
LPCAT4Q643R3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LPCAT4Q643R3 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
LPCAT4Q643R3 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LPCAT4Q643R3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
LPCAT4Q643R3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LPCAT4Q643R3 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.47■□□□□ 0.07
LPCAT4Q643R3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
LPCAT4Q643R3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
LPCAT4Q643R3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LPCAT4Q643R3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.47■□□□□ 0.07
LPCAT4Q643R3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.47■□□□□ 0.07
LPCAT4Q643R3 GPAA1P2-202ENST00000606848 1787 ntBASIC15.47■□□□□ 0.07
LPCAT4Q643R3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LPCAT4Q643R3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
LPCAT4Q643R3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 AC015656.1-201ENST00000624209 3578 ntBASIC15.46■□□□□ 0.07
LPCAT4Q643R3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 AL390755.1-201ENST00000623716 2027 ntBASIC15.46■□□□□ 0.07
LPCAT4Q643R3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 ACTG1P4-201ENST00000425123 1122 ntBASIC15.46■□□□□ 0.07
LPCAT4Q643R3 AC092597.1-201ENST00000487352 616 ntBASIC15.46■□□□□ 0.07
LPCAT4Q643R3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 AC010654.1-201ENST00000615722 808 ntBASIC15.46■□□□□ 0.07
LPCAT4Q643R3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 AC010947.1-201ENST00000623454 693 ntBASIC15.46■□□□□ 0.07
LPCAT4Q643R3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.46■□□□□ 0.07
LPCAT4Q643R3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.46■□□□□ 0.07
LPCAT4Q643R3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
LPCAT4Q643R3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.46■□□□□ 0.06
LPCAT4Q643R3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
LPCAT4Q643R3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
LPCAT4Q643R3 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.46■□□□□ 0.06
LPCAT4Q643R3 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 SPDYE15P-201ENST00000424157 909 ntBASIC15.45■□□□□ 0.06
LPCAT4Q643R3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 NAPSB-206ENST00000562112 1266 ntBASIC15.45■□□□□ 0.06
LPCAT4Q643R3 AL023973.1-201ENST00000624619 620 ntBASIC15.45■□□□□ 0.06
LPCAT4Q643R3 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.45■□□□□ 0.06
LPCAT4Q643R3 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms