Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LGSNQ5TDP6 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.55■□□□□ 0.24
LGSNQ5TDP6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LGSNQ5TDP6 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LGSNQ5TDP6 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LGSNQ5TDP6 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LGSNQ5TDP6 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.55■□□□□ 0.24
LGSNQ5TDP6 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.55■□□□□ 0.24
LGSNQ5TDP6 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LGSNQ5TDP6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.55■□□□□ 0.24
LGSNQ5TDP6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LGSNQ5TDP6 SLC25A6P2-201ENST00000497974 877 ntBASIC16.55■□□□□ 0.24
LGSNQ5TDP6 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LGSNQ5TDP6 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.55■□□□□ 0.24
LGSNQ5TDP6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.55■□□□□ 0.24
LGSNQ5TDP6 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
LGSNQ5TDP6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.55■□□□□ 0.24
LGSNQ5TDP6 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.55■□□□□ 0.24
LGSNQ5TDP6 PGM5P2-202ENST00000637225 1043 ntBASIC16.55■□□□□ 0.24
LGSNQ5TDP6 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LGSNQ5TDP6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.55■□□□□ 0.24
LGSNQ5TDP6 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LGSNQ5TDP6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LGSNQ5TDP6 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.55■□□□□ 0.24
LGSNQ5TDP6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.55■□□□□ 0.24
LGSNQ5TDP6 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LGSNQ5TDP6 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LGSNQ5TDP6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LGSNQ5TDP6 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LGSNQ5TDP6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.55■□□□□ 0.24
LGSNQ5TDP6 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LGSNQ5TDP6 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LGSNQ5TDP6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LGSNQ5TDP6 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LGSNQ5TDP6 AL592424.1-201ENST00000563624 1536 ntBASIC16.55■□□□□ 0.24
LGSNQ5TDP6 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.54■□□□□ 0.24
LGSNQ5TDP6 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 PRAL-201ENST00000624952 3286 ntBASIC16.54■□□□□ 0.24
LGSNQ5TDP6 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.54■□□□□ 0.24
LGSNQ5TDP6 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 SCARNA2-201ENST00000458748 420 ntBASIC16.54■□□□□ 0.24
LGSNQ5TDP6 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 AL355877.3-201ENST00000622820 899 ntBASIC16.54■□□□□ 0.24
LGSNQ5TDP6 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.54■□□□□ 0.24
LGSNQ5TDP6 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
LGSNQ5TDP6 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LGSNQ5TDP6 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.53■□□□□ 0.24
LGSNQ5TDP6 AC005622.1-201ENST00000636801 1703 ntBASIC16.53■□□□□ 0.24
LGSNQ5TDP6 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LGSNQ5TDP6 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
LGSNQ5TDP6 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LGSNQ5TDP6 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LGSNQ5TDP6 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LGSNQ5TDP6 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.53■□□□□ 0.24
LGSNQ5TDP6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.53■□□□□ 0.24
LGSNQ5TDP6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.53■□□□□ 0.24
LGSNQ5TDP6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LGSNQ5TDP6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.53■□□□□ 0.24
LGSNQ5TDP6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LGSNQ5TDP6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LGSNQ5TDP6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.53■□□□□ 0.24
LGSNQ5TDP6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms