Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 AC010491.1-201ENST00000563101 2797 ntBASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH2D4BQ5SQS7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 OR2I1P-209ENST00000641730 5365 ntBASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 AC132008.2-207ENST00000454517 770 ntBASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 MIR3652-201ENST00000579335 131 ntBASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 MPDU1-223ENST00000582151 728 ntBASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 AL022326.1-202ENST00000641533 845 ntBASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 AC092384.3-202ENST00000564646 2873 ntBASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SH2D4BQ5SQS7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 FOSL1P1-201ENST00000511041 816 ntBASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 AL139424.1-201ENST00000607572 797 ntBASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SH2D4BQ5SQS7 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms