Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 IGHV3-47-201ENST00000425060 335 ntBASIC14.7□□□□□ -0.06
CCDC58Q4VC31 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 MPDU1-223ENST00000582151 728 ntBASIC14.7□□□□□ -0.06
CCDC58Q4VC31 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 AL121956.5-201ENST00000625261 221 ntBASIC14.7□□□□□ -0.06
CCDC58Q4VC31 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 AC010491.1-201ENST00000563101 2797 ntBASIC14.7□□□□□ -0.06
CCDC58Q4VC31 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 AP005117.1-202ENST00000581724 1908 ntBASIC14.7□□□□□ -0.06
CCDC58Q4VC31 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC58Q4VC31 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 NCF1C-201ENST00000438382 1427 ntBASIC14.69□□□□□ -0.06
CCDC58Q4VC31 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 DUX4L26-201ENST00000489078 1255 ntBASIC14.69□□□□□ -0.06
CCDC58Q4VC31 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 AC073347.1-201ENST00000421633 2643 ntBASIC14.69□□□□□ -0.06
CCDC58Q4VC31 PCGF3-213ENST00000620529 1899 ntBASIC14.69□□□□□ -0.06
CCDC58Q4VC31 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 AC022532.1-201ENST00000624563 1728 ntBASIC14.69□□□□□ -0.06
CCDC58Q4VC31 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC58Q4VC31 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.68□□□□□ -0.06
CCDC58Q4VC31 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC58Q4VC31 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC58Q4VC31 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC58Q4VC31 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC58Q4VC31 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC58Q4VC31 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms