Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 AC005622.1-201ENST00000636801 1703 ntBASIC19.03■□□□□ 0.64
CCDC96Q2M329 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC96Q2M329 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC96Q2M329 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC96Q2M329 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC96Q2M329 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC96Q2M329 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC96Q2M329 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC96Q2M329 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CCDC96Q2M329 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC96Q2M329 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC96Q2M329 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC96Q2M329 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC96Q2M329 INGX-202ENST00000489074 768 ntBASIC19.02■□□□□ 0.64
CCDC96Q2M329 AC097493.3-201ENST00000509725 367 ntBASIC19.02■□□□□ 0.64
CCDC96Q2M329 RNA5SP421-201ENST00000516864 134 ntBASIC19.02■□□□□ 0.64
CCDC96Q2M329 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC96Q2M329 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.02■□□□□ 0.64
CCDC96Q2M329 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
CCDC96Q2M329 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.02■□□□□ 0.64
CCDC96Q2M329 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.02■□□□□ 0.64
CCDC96Q2M329 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC96Q2M329 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC96Q2M329 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC96Q2M329 SPDYE12P-201ENST00000618416 771 ntBASIC19.02■□□□□ 0.64
CCDC96Q2M329 AC073592.8-201ENST00000624126 511 ntBASIC19.02■□□□□ 0.64
CCDC96Q2M329 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC96Q2M329 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC96Q2M329 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CCDC96Q2M329 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
CCDC96Q2M329 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.02■□□□□ 0.63
CCDC96Q2M329 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CCDC96Q2M329 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC96Q2M329 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC96Q2M329 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC96Q2M329 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.02■□□□□ 0.63
CCDC96Q2M329 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
CCDC96Q2M329 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.02■□□□□ 0.63
CCDC96Q2M329 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
CCDC96Q2M329 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC96Q2M329 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC96Q2M329 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC96Q2M329 FLJ38576-201ENST00000623820 2459 ntBASIC19.01■□□□□ 0.63
CCDC96Q2M329 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC96Q2M329 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CCDC96Q2M329 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC96Q2M329 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC96Q2M329 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC96Q2M329 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC96Q2M329 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC96Q2M329 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC96Q2M329 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC96Q2M329 AC092580.3-201ENST00000430932 139 ntBASIC19.01■□□□□ 0.63
CCDC96Q2M329 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC96Q2M329 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC96Q2M329 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC96Q2M329 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC96Q2M329 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC96Q2M329 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC96Q2M329 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC96Q2M329 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC96Q2M329 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC96Q2M329 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
CCDC96Q2M329 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC96Q2M329 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC96Q2M329 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC96Q2M329 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC96Q2M329 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC96Q2M329 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19■□□□□ 0.63
CCDC96Q2M329 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC96Q2M329 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC96Q2M329 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC96Q2M329 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19■□□□□ 0.63
CCDC96Q2M329 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC96Q2M329 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC96Q2M329 FER1L4-210ENST00000615531 5998 ntBASIC19■□□□□ 0.63
CCDC96Q2M329 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCDC96Q2M329 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC96Q2M329 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19■□□□□ 0.63
CCDC96Q2M329 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC96Q2M329 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19■□□□□ 0.63
CCDC96Q2M329 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19■□□□□ 0.63
CCDC96Q2M329 AC027369.6-201ENST00000525520 931 ntBASIC19■□□□□ 0.63
CCDC96Q2M329 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC96Q2M329 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC96Q2M329 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19■□□□□ 0.63
CCDC96Q2M329 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19■□□□□ 0.63
CCDC96Q2M329 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19■□□□□ 0.63
CCDC96Q2M329 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19■□□□□ 0.63
CCDC96Q2M329 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19■□□□□ 0.63
CCDC96Q2M329 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19■□□□□ 0.63
CCDC96Q2M329 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCDC96Q2M329 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19■□□□□ 0.63
CCDC96Q2M329 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19■□□□□ 0.63
CCDC96Q2M329 AC079328.2-201ENST00000561241 3354 ntBASIC19■□□□□ 0.63
CCDC96Q2M329 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC96Q2M329 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19■□□□□ 0.63
CCDC96Q2M329 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19■□□□□ 0.63
CCDC96Q2M329 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CCDC96Q2M329 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms