Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SSBP1Q04837 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP1Q04837 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.87□□□□□ -0.19
SSBP1Q04837 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP1Q04837 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SSBP1Q04837 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP1Q04837 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP1Q04837 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP1Q04837 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP1Q04837 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP1Q04837 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SSBP1Q04837 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP1Q04837 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP1Q04837 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP1Q04837 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP1Q04837 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP1Q04837 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP1Q04837 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP1Q04837 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.86□□□□□ -0.19
SSBP1Q04837 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP1Q04837 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.86□□□□□ -0.19
SSBP1Q04837 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP1Q04837 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP1Q04837 ARMC10P1-201ENST00000313754 855 ntBASIC13.86□□□□□ -0.19
SSBP1Q04837 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP1Q04837 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP1Q04837 HAUS4P1-201ENST00000406739 1145 ntBASIC13.86□□□□□ -0.19
SSBP1Q04837 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.86□□□□□ -0.19
SSBP1Q04837 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SSBP1Q04837 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SSBP1Q04837 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.86□□□□□ -0.19
SSBP1Q04837 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.86□□□□□ -0.19
SSBP1Q04837 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.86□□□□□ -0.19
SSBP1Q04837 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.86□□□□□ -0.19
SSBP1Q04837 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.86□□□□□ -0.19
SSBP1Q04837 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.86□□□□□ -0.19
SSBP1Q04837 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP1Q04837 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.86□□□□□ -0.19
SSBP1Q04837 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SSBP1Q04837 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SSBP1Q04837 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP1Q04837 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.86□□□□□ -0.19
SSBP1Q04837 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.86□□□□□ -0.19
SSBP1Q04837 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.86□□□□□ -0.19
SSBP1Q04837 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP1Q04837 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSBP1Q04837 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SSBP1Q04837 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.85□□□□□ -0.19
SSBP1Q04837 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.85□□□□□ -0.19
SSBP1Q04837 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP1Q04837 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SSBP1Q04837 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP1Q04837 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP1Q04837 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP1Q04837 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP1Q04837 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC13.85□□□□□ -0.19
SSBP1Q04837 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
SSBP1Q04837 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP1Q04837 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
SSBP1Q04837 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP1Q04837 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP1Q04837 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP1Q04837 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.85□□□□□ -0.19
SSBP1Q04837 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.85□□□□□ -0.19
SSBP1Q04837 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.85□□□□□ -0.19
SSBP1Q04837 AC113347.1-201ENST00000413321 391 ntBASIC13.85□□□□□ -0.19
SSBP1Q04837 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SSBP1Q04837 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13.85□□□□□ -0.19
SSBP1Q04837 HCG4-201ENST00000418983 998 ntBASIC13.85□□□□□ -0.19
SSBP1Q04837 AL137013.1-201ENST00000432946 1228 ntBASIC13.85□□□□□ -0.19
SSBP1Q04837 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.85□□□□□ -0.19
SSBP1Q04837 AC092647.4-201ENST00000457211 535 ntBASIC13.85□□□□□ -0.19
SSBP1Q04837 AC091607.1-201ENST00000490318 1060 ntBASIC13.85□□□□□ -0.19
SSBP1Q04837 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.85□□□□□ -0.19
SSBP1Q04837 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC13.85□□□□□ -0.19
SSBP1Q04837 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.85□□□□□ -0.19
SSBP1Q04837 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC13.85□□□□□ -0.19
SSBP1Q04837 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP1Q04837 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SSBP1Q04837 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SSBP1Q04837 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP1Q04837 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
SSBP1Q04837 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.85□□□□□ -0.19
SSBP1Q04837 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.85□□□□□ -0.19
SSBP1Q04837 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP1Q04837 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP1Q04837 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP1Q04837 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP1Q04837 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP1Q04837 SLC22A20-204ENST00000530038 1673 ntBASIC13.85□□□□□ -0.19
SSBP1Q04837 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP1Q04837 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.85□□□□□ -0.19
SSBP1Q04837 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.85□□□□□ -0.19
SSBP1Q04837 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SSBP1Q04837 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSBP1Q04837 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.84□□□□□ -0.19
SSBP1Q04837 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.84□□□□□ -0.19
SSBP1Q04837 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.84□□□□□ -0.19
SSBP1Q04837 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.84□□□□□ -0.19
SSBP1Q04837 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms