Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCS1Q01581 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCS1Q01581 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCS1Q01581 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCS1Q01581 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
HMGCS1Q01581 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
HMGCS1Q01581 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HMGCS1Q01581 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
HMGCS1Q01581 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.79■□□□□ 0.12
HMGCS1Q01581 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.79■□□□□ 0.12
HMGCS1Q01581 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.79■□□□□ 0.12
HMGCS1Q01581 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCS1Q01581 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
HMGCS1Q01581 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCS1Q01581 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCS1Q01581 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HMGCS1Q01581 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCS1Q01581 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCS1Q01581 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HMGCS1Q01581 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.79■□□□□ 0.12
HMGCS1Q01581 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCS1Q01581 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.79■□□□□ 0.12
HMGCS1Q01581 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.79■□□□□ 0.12
HMGCS1Q01581 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCS1Q01581 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCS1Q01581 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCS1Q01581 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCS1Q01581 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.79■□□□□ 0.12
HMGCS1Q01581 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCS1Q01581 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCS1Q01581 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCS1Q01581 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
HMGCS1Q01581 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
HMGCS1Q01581 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCS1Q01581 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCS1Q01581 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
HMGCS1Q01581 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HMGCS1Q01581 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.78■□□□□ 0.12
HMGCS1Q01581 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCS1Q01581 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HMGCS1Q01581 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCS1Q01581 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
HMGCS1Q01581 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCS1Q01581 AC112504.1-201ENST00000623415 1841 ntBASIC15.78■□□□□ 0.12
HMGCS1Q01581 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCS1Q01581 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
HMGCS1Q01581 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.78■□□□□ 0.12
HMGCS1Q01581 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCS1Q01581 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCS1Q01581 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCS1Q01581 PMS2P4-201ENST00000412466 1052 ntBASIC15.78■□□□□ 0.12
HMGCS1Q01581 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.78■□□□□ 0.12
HMGCS1Q01581 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.78■□□□□ 0.12
HMGCS1Q01581 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCS1Q01581 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCS1Q01581 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCS1Q01581 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.78■□□□□ 0.12
HMGCS1Q01581 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.78■□□□□ 0.12
HMGCS1Q01581 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.78■□□□□ 0.12
HMGCS1Q01581 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.78■□□□□ 0.12
HMGCS1Q01581 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCS1Q01581 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.78■□□□□ 0.12
HMGCS1Q01581 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCS1Q01581 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.78■□□□□ 0.12
HMGCS1Q01581 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.78■□□□□ 0.12
HMGCS1Q01581 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCS1Q01581 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCS1Q01581 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
HMGCS1Q01581 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCS1Q01581 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCS1Q01581 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
HMGCS1Q01581 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCS1Q01581 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.78■□□□□ 0.12
HMGCS1Q01581 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
HMGCS1Q01581 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
HMGCS1Q01581 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HMGCS1Q01581 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HMGCS1Q01581 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
HMGCS1Q01581 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
HMGCS1Q01581 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
HMGCS1Q01581 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.77■□□□□ 0.12
HMGCS1Q01581 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HMGCS1Q01581 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HMGCS1Q01581 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
HMGCS1Q01581 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
HMGCS1Q01581 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.77■□□□□ 0.12
HMGCS1Q01581 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HMGCS1Q01581 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.77■□□□□ 0.12
HMGCS1Q01581 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HMGCS1Q01581 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
HMGCS1Q01581 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.77■□□□□ 0.12
HMGCS1Q01581 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
HMGCS1Q01581 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
HMGCS1Q01581 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
HMGCS1Q01581 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.77■□□□□ 0.12
HMGCS1Q01581 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.77■□□□□ 0.12
HMGCS1Q01581 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.77■□□□□ 0.12
HMGCS1Q01581 AC096734.2-201ENST00000562054 433 ntBASIC15.77■□□□□ 0.12
HMGCS1Q01581 MIR3909-201ENST00000579518 119 ntBASIC15.77■□□□□ 0.12
HMGCS1Q01581 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms