Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM4P67936 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TPM4P67936 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TPM4P67936 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.41■□□□□ 0.54
TPM4P67936 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.41■□□□□ 0.54
TPM4P67936 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC18.41■□□□□ 0.54
TPM4P67936 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC18.4■□□□□ 0.54
TPM4P67936 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM4P67936 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.4■□□□□ 0.54
TPM4P67936 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM4P67936 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC18.4■□□□□ 0.54
TPM4P67936 AC144831.1-201ENST00000573312 2656 ntBASIC18.4■□□□□ 0.54
TPM4P67936 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TPM4P67936 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM4P67936 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM4P67936 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM4P67936 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.4■□□□□ 0.54
TPM4P67936 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TPM4P67936 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.4■□□□□ 0.54
TPM4P67936 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.4■□□□□ 0.54
TPM4P67936 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.4■□□□□ 0.54
TPM4P67936 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.4■□□□□ 0.54
TPM4P67936 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.4■□□□□ 0.54
TPM4P67936 AL591684.3-201ENST00000605187 298 ntBASIC18.4■□□□□ 0.54
TPM4P67936 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.4■□□□□ 0.54
TPM4P67936 AL589182.2-201ENST00000619332 1049 ntBASIC18.4■□□□□ 0.54
TPM4P67936 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM4P67936 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TPM4P67936 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM4P67936 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.4■□□□□ 0.54
TPM4P67936 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
TPM4P67936 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TPM4P67936 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TPM4P67936 AC069224.1-201ENST00000566372 1715 ntBASIC18.4■□□□□ 0.54
TPM4P67936 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TPM4P67936 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM4P67936 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TPM4P67936 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TPM4P67936 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM4P67936 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TPM4P67936 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TPM4P67936 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TPM4P67936 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TPM4P67936 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TPM4P67936 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TPM4P67936 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TPM4P67936 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPM4P67936 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TPM4P67936 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TPM4P67936 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.39■□□□□ 0.53
TPM4P67936 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TPM4P67936 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPM4P67936 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPM4P67936 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPM4P67936 AL031133.1-201ENST00000406807 723 ntBASIC18.39■□□□□ 0.53
TPM4P67936 NUS1P2-201ENST00000417358 873 ntBASIC18.39■□□□□ 0.53
TPM4P67936 AC087163.2-201ENST00000457299 853 ntBASIC18.39■□□□□ 0.53
TPM4P67936 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.39■□□□□ 0.53
TPM4P67936 AP000867.3-201ENST00000524675 377 ntBASIC18.39■□□□□ 0.53
TPM4P67936 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.39■□□□□ 0.53
TPM4P67936 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.39■□□□□ 0.53
TPM4P67936 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.39■□□□□ 0.53
TPM4P67936 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPM4P67936 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TPM4P67936 AC099336.1-202ENST00000602961 463 ntBASIC18.39■□□□□ 0.53
TPM4P67936 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPM4P67936 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.39■□□□□ 0.53
TPM4P67936 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPM4P67936 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.39■□□□□ 0.53
TPM4P67936 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TPM4P67936 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPM4P67936 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPM4P67936 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPM4P67936 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TPM4P67936 AP005117.1-201ENST00000584346 1413 ntBASIC18.39■□□□□ 0.53
TPM4P67936 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPM4P67936 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.39■□□□□ 0.53
TPM4P67936 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.39■□□□□ 0.53
TPM4P67936 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.38■□□□□ 0.53
TPM4P67936 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPM4P67936 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.38■□□□□ 0.53
TPM4P67936 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.38■□□□□ 0.53
TPM4P67936 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPM4P67936 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPM4P67936 LINC02228-204ENST00000642115 2962 ntBASIC18.38■□□□□ 0.53
TPM4P67936 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPM4P67936 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPM4P67936 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TPM4P67936 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TPM4P67936 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.38■□□□□ 0.53
TPM4P67936 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TPM4P67936 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPM4P67936 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.38■□□□□ 0.53
TPM4P67936 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.38■□□□□ 0.53
TPM4P67936 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.38■□□□□ 0.53
TPM4P67936 AP002383.4-201ENST00000442518 975 ntBASIC18.38■□□□□ 0.53
TPM4P67936 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.38■□□□□ 0.53
TPM4P67936 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.38■□□□□ 0.53
TPM4P67936 AC012615.1-201ENST00000565797 1299 ntBASIC18.38■□□□□ 0.53
TPM4P67936 RN7SL850P-201ENST00000579959 291 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms