Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.65□□□□□ -0.06
CLRN1P58418 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.65□□□□□ -0.06
CLRN1P58418 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLRN1P58418 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.65□□□□□ -0.06
CLRN1P58418 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLRN1P58418 PDPK2P-202ENST00000562415 1191 ntBASIC14.65□□□□□ -0.06
CLRN1P58418 FAM197Y3-203ENST00000618346 717 ntBASIC14.65□□□□□ -0.06
CLRN1P58418 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
CLRN1P58418 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.65□□□□□ -0.06
CLRN1P58418 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.65□□□□□ -0.06
CLRN1P58418 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CLRN1P58418 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLRN1P58418 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.65□□□□□ -0.06
CLRN1P58418 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.65□□□□□ -0.06
CLRN1P58418 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
CLRN1P58418 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLRN1P58418 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLRN1P58418 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CLRN1P58418 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CLRN1P58418 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
CLRN1P58418 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLRN1P58418 REXO1L8P-201ENST00000604378 1897 ntBASIC14.65□□□□□ -0.06
CLRN1P58418 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CLRN1P58418 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLRN1P58418 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CLRN1P58418 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLRN1P58418 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLRN1P58418 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLRN1P58418 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.65□□□□□ -0.06
CLRN1P58418 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.65□□□□□ -0.06
CLRN1P58418 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.65□□□□□ -0.06
CLRN1P58418 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLRN1P58418 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLRN1P58418 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLRN1P58418 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLRN1P58418 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLRN1P58418 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.64□□□□□ -0.07
CLRN1P58418 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLRN1P58418 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CLRN1P58418 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLRN1P58418 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLRN1P58418 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLRN1P58418 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLRN1P58418 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLRN1P58418 AL596087.1-201ENST00000400979 1969 ntBASIC14.64□□□□□ -0.07
CLRN1P58418 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLRN1P58418 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLRN1P58418 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLRN1P58418 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.64□□□□□ -0.07
CLRN1P58418 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLRN1P58418 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLRN1P58418 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLRN1P58418 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLRN1P58418 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLRN1P58418 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
CLRN1P58418 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLRN1P58418 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLRN1P58418 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLRN1P58418 MIR940-201ENST00000401276 94 ntBASIC14.64□□□□□ -0.07
CLRN1P58418 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLRN1P58418 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLRN1P58418 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.64□□□□□ -0.07
CLRN1P58418 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.64□□□□□ -0.07
CLRN1P58418 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
CLRN1P58418 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.64□□□□□ -0.07
CLRN1P58418 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.64□□□□□ -0.07
CLRN1P58418 AL161645.1-201ENST00000622716 1255 ntBASIC14.64□□□□□ -0.07
CLRN1P58418 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CLRN1P58418 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLRN1P58418 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.64□□□□□ -0.07
CLRN1P58418 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.64□□□□□ -0.07
CLRN1P58418 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CLRN1P58418 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.64□□□□□ -0.07
CLRN1P58418 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLRN1P58418 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLRN1P58418 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.64□□□□□ -0.07
CLRN1P58418 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CLRN1P58418 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLRN1P58418 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLRN1P58418 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.64□□□□□ -0.07
CLRN1P58418 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.64□□□□□ -0.07
CLRN1P58418 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLRN1P58418 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.64□□□□□ -0.07
CLRN1P58418 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLRN1P58418 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLRN1P58418 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLRN1P58418 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.63□□□□□ -0.07
CLRN1P58418 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.63□□□□□ -0.07
CLRN1P58418 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLRN1P58418 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLRN1P58418 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CLRN1P58418 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLRN1P58418 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
CLRN1P58418 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLRN1P58418 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLRN1P58418 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CLRN1P58418 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CLRN1P58418 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLRN1P58418 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLRN1P58418 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms