Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PDX1P52945 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDX1P52945 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.86■□□□□ 0.13
PDX1P52945 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PDX1P52945 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDX1P52945 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.86■□□□□ 0.13
PDX1P52945 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PDX1P52945 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDX1P52945 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDX1P52945 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDX1P52945 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDX1P52945 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDX1P52945 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PDX1P52945 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PDX1P52945 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PDX1P52945 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDX1P52945 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDX1P52945 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.85■□□□□ 0.13
PDX1P52945 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PDX1P52945 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PDX1P52945 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDX1P52945 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDX1P52945 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDX1P52945 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDX1P52945 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PDX1P52945 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PDX1P52945 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDX1P52945 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
PDX1P52945 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PDX1P52945 NME2P1-201ENST00000426182 414 ntBASIC15.85■□□□□ 0.13
PDX1P52945 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.85■□□□□ 0.13
PDX1P52945 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.85■□□□□ 0.13
PDX1P52945 CR383656.12-201ENST00000549567 513 ntBASIC15.85■□□□□ 0.13
PDX1P52945 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.85■□□□□ 0.13
PDX1P52945 AC009407.1-201ENST00000568958 598 ntBASIC15.85■□□□□ 0.13
PDX1P52945 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDX1P52945 AC027307.3-201ENST00000594262 1100 ntBASIC15.85■□□□□ 0.13
PDX1P52945 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.85■□□□□ 0.13
PDX1P52945 AC008738.7-201ENST00000609744 511 ntBASIC15.85■□□□□ 0.13
PDX1P52945 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PDX1P52945 AL358472.5-202ENST00000641448 1267 ntBASIC15.85■□□□□ 0.13
PDX1P52945 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDX1P52945 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.85■□□□□ 0.13
PDX1P52945 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PDX1P52945 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PDX1P52945 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
PDX1P52945 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PDX1P52945 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.85■□□□□ 0.13
PDX1P52945 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDX1P52945 AL671710.1-201ENST00000610245 2349 ntBASIC15.85■□□□□ 0.13
PDX1P52945 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDX1P52945 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.85■□□□□ 0.13
PDX1P52945 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDX1P52945 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PDX1P52945 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.85■□□□□ 0.13
PDX1P52945 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PDX1P52945 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.85■□□□□ 0.13
PDX1P52945 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PDX1P52945 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PDX1P52945 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.85■□□□□ 0.13
PDX1P52945 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDX1P52945 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PDX1P52945 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDX1P52945 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDX1P52945 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDX1P52945 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDX1P52945 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PDX1P52945 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDX1P52945 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PDX1P52945 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.84■□□□□ 0.13
PDX1P52945 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDX1P52945 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PDX1P52945 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDX1P52945 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDX1P52945 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDX1P52945 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.84■□□□□ 0.13
PDX1P52945 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDX1P52945 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
PDX1P52945 FAM220BP-201ENST00000377689 816 ntBASIC15.84■□□□□ 0.13
PDX1P52945 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDX1P52945 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.84■□□□□ 0.13
PDX1P52945 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
PDX1P52945 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PDX1P52945 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.84■□□□□ 0.13
PDX1P52945 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDX1P52945 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDX1P52945 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.84■□□□□ 0.13
PDX1P52945 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.84■□□□□ 0.13
PDX1P52945 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDX1P52945 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDX1P52945 AL035456.1-201ENST00000456064 1369 ntBASIC15.84■□□□□ 0.13
PDX1P52945 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDX1P52945 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDX1P52945 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.84■□□□□ 0.13
PDX1P52945 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
PDX1P52945 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
PDX1P52945 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PDX1P52945 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PDX1P52945 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.83■□□□□ 0.13
PDX1P52945 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms