Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.11■□□□□ 0.17
GTF2A1P52655 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GTF2A1P52655 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GTF2A1P52655 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GTF2A1P52655 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
GTF2A1P52655 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
GTF2A1P52655 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
GTF2A1P52655 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GTF2A1P52655 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
GTF2A1P52655 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
GTF2A1P52655 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.1■□□□□ 0.17
GTF2A1P52655 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GTF2A1P52655 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GTF2A1P52655 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GTF2A1P52655 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
GTF2A1P52655 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GTF2A1P52655 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GTF2A1P52655 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GTF2A1P52655 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.1■□□□□ 0.17
GTF2A1P52655 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.1■□□□□ 0.17
GTF2A1P52655 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.1■□□□□ 0.17
GTF2A1P52655 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.1■□□□□ 0.17
GTF2A1P52655 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GTF2A1P52655 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GTF2A1P52655 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GTF2A1P52655 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
GTF2A1P52655 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.1■□□□□ 0.17
GTF2A1P52655 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.1■□□□□ 0.17
GTF2A1P52655 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GTF2A1P52655 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GTF2A1P52655 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.1■□□□□ 0.17
GTF2A1P52655 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GTF2A1P52655 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
GTF2A1P52655 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GTF2A1P52655 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
GTF2A1P52655 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GTF2A1P52655 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
GTF2A1P52655 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GTF2A1P52655 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
GTF2A1P52655 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC16.09■□□□□ 0.17
GTF2A1P52655 AL163051.1-201ENST00000569214 1512 ntBASIC16.09■□□□□ 0.17
GTF2A1P52655 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
GTF2A1P52655 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
GTF2A1P52655 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
GTF2A1P52655 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GTF2A1P52655 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
GTF2A1P52655 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
GTF2A1P52655 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.09■□□□□ 0.17
GTF2A1P52655 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GTF2A1P52655 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.09■□□□□ 0.17
GTF2A1P52655 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
GTF2A1P52655 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC16.09■□□□□ 0.17
GTF2A1P52655 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
GTF2A1P52655 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GTF2A1P52655 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
GTF2A1P52655 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GTF2A1P52655 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
GTF2A1P52655 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GTF2A1P52655 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.09■□□□□ 0.17
GTF2A1P52655 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GTF2A1P52655 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
GTF2A1P52655 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.09■□□□□ 0.17
GTF2A1P52655 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GTF2A1P52655 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.09■□□□□ 0.17
GTF2A1P52655 AC026271.3-201ENST00000571884 352 ntBASIC16.09■□□□□ 0.17
GTF2A1P52655 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.09■□□□□ 0.17
GTF2A1P52655 RN7SL471P-201ENST00000580476 299 ntBASIC16.09■□□□□ 0.17
GTF2A1P52655 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.09■□□□□ 0.17
GTF2A1P52655 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC16.09■□□□□ 0.17
GTF2A1P52655 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GTF2A1P52655 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GTF2A1P52655 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
GTF2A1P52655 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.09■□□□□ 0.17
GTF2A1P52655 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GTF2A1P52655 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GTF2A1P52655 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
GTF2A1P52655 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GTF2A1P52655 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC16.09■□□□□ 0.17
GTF2A1P52655 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GTF2A1P52655 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.09■□□□□ 0.17
GTF2A1P52655 AC009102.3-201ENST00000623118 1491 ntBASIC16.09■□□□□ 0.17
GTF2A1P52655 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
GTF2A1P52655 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.09■□□□□ 0.17
GTF2A1P52655 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GTF2A1P52655 CICP16-201ENST00000502609 2813 ntBASIC16.09■□□□□ 0.17
GTF2A1P52655 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC16.08■□□□□ 0.17
GTF2A1P52655 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
GTF2A1P52655 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.08■□□□□ 0.17
GTF2A1P52655 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC16.08■□□□□ 0.17
GTF2A1P52655 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.17
GTF2A1P52655 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
GTF2A1P52655 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
GTF2A1P52655 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.08■□□□□ 0.17
GTF2A1P52655 AL928921.2-201ENST00000641325 2442 ntBASIC16.08■□□□□ 0.17
GTF2A1P52655 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
GTF2A1P52655 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
GTF2A1P52655 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
GTF2A1P52655 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
GTF2A1P52655 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
GTF2A1P52655 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms