Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HCFC1P51610 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HCFC1P51610 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HCFC1P51610 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.14□□□□□ -0.15
HCFC1P51610 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HCFC1P51610 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.14□□□□□ -0.15
HCFC1P51610 AC026979.3-201ENST00000607315 403 ntBASIC14.14□□□□□ -0.15
HCFC1P51610 MIR6069-201ENST00000620069 79 ntBASIC14.14□□□□□ -0.15
HCFC1P51610 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HCFC1P51610 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HCFC1P51610 AL589702.1-201ENST00000641229 1509 ntBASIC14.13□□□□□ -0.15
HCFC1P51610 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HCFC1P51610 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HCFC1P51610 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HCFC1P51610 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
HCFC1P51610 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.13□□□□□ -0.15
HCFC1P51610 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
HCFC1P51610 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.13□□□□□ -0.15
HCFC1P51610 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
HCFC1P51610 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HCFC1P51610 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HCFC1P51610 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HCFC1P51610 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HCFC1P51610 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.13□□□□□ -0.15
HCFC1P51610 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HCFC1P51610 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.13□□□□□ -0.15
HCFC1P51610 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HCFC1P51610 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HCFC1P51610 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HCFC1P51610 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.13□□□□□ -0.15
HCFC1P51610 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HCFC1P51610 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.13□□□□□ -0.15
HCFC1P51610 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.13□□□□□ -0.15
HCFC1P51610 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.13□□□□□ -0.15
HCFC1P51610 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.13□□□□□ -0.15
HCFC1P51610 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HCFC1P51610 TMEM261P1-201ENST00000604899 340 ntBASIC14.13□□□□□ -0.15
HCFC1P51610 MIR6799-201ENST00000620297 69 ntBASIC14.13□□□□□ -0.15
HCFC1P51610 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
HCFC1P51610 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.13□□□□□ -0.15
HCFC1P51610 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HCFC1P51610 COX11-210ENST00000639671 696 ntBASIC14.13□□□□□ -0.15
HCFC1P51610 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HCFC1P51610 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HCFC1P51610 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HCFC1P51610 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
HCFC1P51610 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HCFC1P51610 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
HCFC1P51610 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HCFC1P51610 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
HCFC1P51610 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.12□□□□□ -0.15
HCFC1P51610 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCFC1P51610 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCFC1P51610 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCFC1P51610 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HCFC1P51610 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCFC1P51610 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.12□□□□□ -0.15
HCFC1P51610 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCFC1P51610 AZGP1P1-201ENST00000411909 902 ntBASIC14.12□□□□□ -0.15
HCFC1P51610 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.12□□□□□ -0.15
HCFC1P51610 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.12□□□□□ -0.15
HCFC1P51610 AC092552.1-201ENST00000547243 906 ntBASIC14.12□□□□□ -0.15
HCFC1P51610 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCFC1P51610 AC015936.2-201ENST00000593177 259 ntBASIC14.12□□□□□ -0.15
HCFC1P51610 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.12□□□□□ -0.15
HCFC1P51610 LINC01115-203ENST00000606068 577 ntBASIC14.12□□□□□ -0.15
HCFC1P51610 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCFC1P51610 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCFC1P51610 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HCFC1P51610 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCFC1P51610 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCFC1P51610 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.12□□□□□ -0.15
HCFC1P51610 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HCFC1P51610 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCFC1P51610 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.12□□□□□ -0.15
HCFC1P51610 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCFC1P51610 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.12□□□□□ -0.15
HCFC1P51610 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.12□□□□□ -0.15
HCFC1P51610 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
HCFC1P51610 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.12□□□□□ -0.15
HCFC1P51610 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.12□□□□□ -0.15
HCFC1P51610 AC092658.1-201ENST00000505836 891 ntBASIC14.12□□□□□ -0.15
HCFC1P51610 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.12□□□□□ -0.15
HCFC1P51610 SDHAP3-202ENST00000515467 728 ntBASIC14.12□□□□□ -0.15
HCFC1P51610 AC104989.1-201ENST00000519711 778 ntBASIC14.12□□□□□ -0.15
HCFC1P51610 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.12□□□□□ -0.15
HCFC1P51610 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
HCFC1P51610 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HCFC1P51610 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCFC1P51610 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.12□□□□□ -0.15
HCFC1P51610 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCFC1P51610 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCFC1P51610 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCFC1P51610 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCFC1P51610 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.11□□□□□ -0.15
HCFC1P51610 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCFC1P51610 AL645728.1-201ENST00000366221 2101 ntBASIC14.11□□□□□ -0.15
HCFC1P51610 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCFC1P51610 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HCFC1P51610 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms