Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
MDH1P40925 AC004817.3-201ENST00000602957 2129 ntBASIC16.46■□□□□ 0.23
MDH1P40925 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.46■□□□□ 0.23
MDH1P40925 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
MDH1P40925 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
MDH1P40925 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
MDH1P40925 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.46■□□□□ 0.23
MDH1P40925 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MDH1P40925 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
MDH1P40925 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MDH1P40925 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MDH1P40925 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MDH1P40925 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.46■□□□□ 0.23
MDH1P40925 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.46■□□□□ 0.23
MDH1P40925 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MDH1P40925 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.46■□□□□ 0.23
MDH1P40925 TSPY7P-201ENST00000431358 1114 ntBASIC16.46■□□□□ 0.23
MDH1P40925 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.46■□□□□ 0.23
MDH1P40925 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.46■□□□□ 0.23
MDH1P40925 AL359075.1-203ENST00000462729 1002 ntBASIC16.46■□□□□ 0.23
MDH1P40925 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.46■□□□□ 0.23
MDH1P40925 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
MDH1P40925 GUSBP12-201ENST00000513727 720 ntBASIC16.46■□□□□ 0.23
MDH1P40925 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.46■□□□□ 0.23
MDH1P40925 AL441883.1-201ENST00000566170 1045 ntBASIC16.46■□□□□ 0.23
MDH1P40925 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MDH1P40925 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.46■□□□□ 0.23
MDH1P40925 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.46■□□□□ 0.23
MDH1P40925 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MDH1P40925 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MDH1P40925 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.46■□□□□ 0.23
MDH1P40925 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MDH1P40925 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
MDH1P40925 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
MDH1P40925 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.46■□□□□ 0.23
MDH1P40925 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
MDH1P40925 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
MDH1P40925 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
MDH1P40925 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.46■□□□□ 0.22
MDH1P40925 AGAP7P-201ENST00000582299 2062 ntBASIC16.46■□□□□ 0.22
MDH1P40925 AGAP14-201ENST00000624701 2060 ntBASIC16.46■□□□□ 0.22
MDH1P40925 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.45■□□□□ 0.22
MDH1P40925 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.45■□□□□ 0.22
MDH1P40925 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
MDH1P40925 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.45■□□□□ 0.22
MDH1P40925 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
MDH1P40925 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MDH1P40925 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MDH1P40925 AC005840.4-201ENST00000541242 2494 ntBASIC16.45■□□□□ 0.22
MDH1P40925 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
MDH1P40925 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
MDH1P40925 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MDH1P40925 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.45■□□□□ 0.22
MDH1P40925 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MDH1P40925 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MDH1P40925 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MDH1P40925 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.45■□□□□ 0.22
MDH1P40925 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.45■□□□□ 0.22
MDH1P40925 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
MDH1P40925 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
MDH1P40925 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
MDH1P40925 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
MDH1P40925 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MDH1P40925 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MDH1P40925 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MDH1P40925 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
MDH1P40925 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.45■□□□□ 0.22
MDH1P40925 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MDH1P40925 AL845331.1-201ENST00000424978 1190 ntBASIC16.45■□□□□ 0.22
MDH1P40925 RN7SL606P-201ENST00000472779 293 ntBASIC16.45■□□□□ 0.22
MDH1P40925 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.45■□□□□ 0.22
MDH1P40925 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.45■□□□□ 0.22
MDH1P40925 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.45■□□□□ 0.22
MDH1P40925 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MDH1P40925 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MDH1P40925 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
MDH1P40925 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
MDH1P40925 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MDH1P40925 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
MDH1P40925 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MDH1P40925 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MDH1P40925 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.45■□□□□ 0.22
MDH1P40925 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.45■□□□□ 0.22
MDH1P40925 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.45■□□□□ 0.22
MDH1P40925 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MDH1P40925 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MDH1P40925 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MDH1P40925 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MDH1P40925 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MDH1P40925 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.44■□□□□ 0.22
MDH1P40925 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.44■□□□□ 0.22
MDH1P40925 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MDH1P40925 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MDH1P40925 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.44■□□□□ 0.22
MDH1P40925 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MDH1P40925 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MDH1P40925 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
MDH1P40925 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MDH1P40925 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MDH1P40925 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms