Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CKS2P33552 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CKS2P33552 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC12.09□□□□□ -0.47
CKS2P33552 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
CKS2P33552 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS2P33552 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS2P33552 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS2P33552 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS2P33552 AC132938.5-201ENST00000624980 1813 ntBASIC12.09□□□□□ -0.47
CKS2P33552 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS2P33552 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.09□□□□□ -0.47
CKS2P33552 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
CKS2P33552 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
CKS2P33552 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
CKS2P33552 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.08□□□□□ -0.47
CKS2P33552 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.08□□□□□ -0.47
CKS2P33552 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
CKS2P33552 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
CKS2P33552 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
CKS2P33552 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
CKS2P33552 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.08□□□□□ -0.48
CKS2P33552 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CKS2P33552 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CKS2P33552 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CKS2P33552 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.08□□□□□ -0.48
CKS2P33552 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CKS2P33552 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CKS2P33552 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CKS2P33552 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.08□□□□□ -0.48
CKS2P33552 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CKS2P33552 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.08□□□□□ -0.48
CKS2P33552 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CKS2P33552 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CKS2P33552 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CKS2P33552 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CKS2P33552 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CKS2P33552 TSPY7P-201ENST00000431358 1114 ntBASIC12.08□□□□□ -0.48
CKS2P33552 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC12.08□□□□□ -0.48
CKS2P33552 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CKS2P33552 GUSBP12-201ENST00000513727 720 ntBASIC12.08□□□□□ -0.48
CKS2P33552 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CKS2P33552 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC12.08□□□□□ -0.48
CKS2P33552 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC12.08□□□□□ -0.48
CKS2P33552 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CKS2P33552 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC12.08□□□□□ -0.48
CKS2P33552 ABBA01031661.1-201ENST00000634362 1253 ntBASIC12.08□□□□□ -0.48
CKS2P33552 AL031432.5-201ENST00000641059 760 ntBASIC12.08□□□□□ -0.48
CKS2P33552 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.08□□□□□ -0.48
CKS2P33552 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CKS2P33552 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CKS2P33552 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.08□□□□□ -0.48
CKS2P33552 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CKS2P33552 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CKS2P33552 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CKS2P33552 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CKS2P33552 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC12.08□□□□□ -0.48
CKS2P33552 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CKS2P33552 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
CKS2P33552 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.08□□□□□ -0.48
CKS2P33552 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC12.08□□□□□ -0.48
CKS2P33552 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CKS2P33552 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CKS2P33552 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.08□□□□□ -0.48
CKS2P33552 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CKS2P33552 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.08□□□□□ -0.48
CKS2P33552 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.08□□□□□ -0.48
CKS2P33552 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CKS2P33552 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CKS2P33552 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC12.08□□□□□ -0.48
CKS2P33552 MME-217ENST00000616757 1315 ntTSL 5 BASIC12.08□□□□□ -0.48
CKS2P33552 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CKS2P33552 AC006486.2-201ENST00000624246 2199 ntBASIC12.08□□□□□ -0.48
CKS2P33552 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.48
CKS2P33552 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CKS2P33552 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS2P33552 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CKS2P33552 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CKS2P33552 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS2P33552 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.07□□□□□ -0.48
CKS2P33552 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.07□□□□□ -0.48
CKS2P33552 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS2P33552 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CKS2P33552 AL031731.1-201ENST00000642131 2094 ntBASIC12.07□□□□□ -0.48
CKS2P33552 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CKS2P33552 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
CKS2P33552 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC12.07□□□□□ -0.48
CKS2P33552 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CKS2P33552 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
CKS2P33552 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CKS2P33552 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.07□□□□□ -0.48
CKS2P33552 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.07□□□□□ -0.48
CKS2P33552 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.07□□□□□ -0.48
CKS2P33552 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS2P33552 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.07□□□□□ -0.48
CKS2P33552 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS2P33552 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS2P33552 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS2P33552 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS2P33552 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS2P33552 HBZP1-201ENST00000354915 429 ntBASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms