Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA3P32297 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA3P32297 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA3P32297 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA3P32297 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA3P32297 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.28■□□□□ 0.36
CHRNA3P32297 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA3P32297 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA3P32297 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA3P32297 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA3P32297 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CHRNA3P32297 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA3P32297 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CHRNA3P32297 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.28■□□□□ 0.36
CHRNA3P32297 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.28■□□□□ 0.36
CHRNA3P32297 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CHRNA3P32297 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CHRNA3P32297 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CHRNA3P32297 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNA3P32297 AC131009.4-201ENST00000624048 1740 ntBASIC17.27■□□□□ 0.36
CHRNA3P32297 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.27■□□□□ 0.36
CHRNA3P32297 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNA3P32297 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.27■□□□□ 0.36
CHRNA3P32297 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CHRNA3P32297 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CHRNA3P32297 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CHRNA3P32297 REXO1L8P-201ENST00000604378 1897 ntBASIC17.27■□□□□ 0.36
CHRNA3P32297 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.27■□□□□ 0.36
CHRNA3P32297 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNA3P32297 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.27■□□□□ 0.36
CHRNA3P32297 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.27■□□□□ 0.36
CHRNA3P32297 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNA3P32297 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNA3P32297 RPSAP43-201ENST00000402237 625 ntBASIC17.27■□□□□ 0.36
CHRNA3P32297 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CHRNA3P32297 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.27■□□□□ 0.36
CHRNA3P32297 RHOQP3-201ENST00000437982 621 ntBASIC17.27■□□□□ 0.36
CHRNA3P32297 SLC25A6P2-201ENST00000497974 877 ntBASIC17.27■□□□□ 0.36
CHRNA3P32297 CXCL1P1-201ENST00000502804 216 ntBASIC17.27■□□□□ 0.36
CHRNA3P32297 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNA3P32297 MIR3687-2-201ENST00000577708 61 ntBASIC17.27■□□□□ 0.36
CHRNA3P32297 MIR3687-1-201ENST00000614492 61 ntBASIC17.27■□□□□ 0.36
CHRNA3P32297 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.27■□□□□ 0.36
CHRNA3P32297 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.27■□□□□ 0.36
CHRNA3P32297 AL513190.1-201ENST00000621254 727 ntBASIC17.27■□□□□ 0.36
CHRNA3P32297 AC004877.2-201ENST00000623941 599 ntBASIC17.27■□□□□ 0.36
CHRNA3P32297 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.27■□□□□ 0.36
CHRNA3P32297 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNA3P32297 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNA3P32297 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHRNA3P32297 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHRNA3P32297 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
CHRNA3P32297 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CHRNA3P32297 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA3P32297 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.26■□□□□ 0.35
CHRNA3P32297 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.26■□□□□ 0.35
CHRNA3P32297 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA3P32297 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA3P32297 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA3P32297 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CHRNA3P32297 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA3P32297 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CHRNA3P32297 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA3P32297 AP005117.1-202ENST00000581724 1908 ntBASIC17.26■□□□□ 0.35
CHRNA3P32297 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA3P32297 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA3P32297 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA3P32297 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA3P32297 MCCD1P2-201ENST00000423228 335 ntBASIC17.26■□□□□ 0.35
CHRNA3P32297 GPX1P2-201ENST00000429271 606 ntBASIC17.26■□□□□ 0.35
CHRNA3P32297 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.26■□□□□ 0.35
CHRNA3P32297 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.26■□□□□ 0.35
CHRNA3P32297 AC112482.1-201ENST00000492080 688 ntBASIC17.26■□□□□ 0.35
CHRNA3P32297 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA3P32297 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.26■□□□□ 0.35
CHRNA3P32297 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CHRNA3P32297 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.26■□□□□ 0.35
CHRNA3P32297 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CHRNA3P32297 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CHRNA3P32297 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA3P32297 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.26■□□□□ 0.35
CHRNA3P32297 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA3P32297 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA3P32297 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA3P32297 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.26■□□□□ 0.35
CHRNA3P32297 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CHRNA3P32297 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.26■□□□□ 0.35
CHRNA3P32297 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA3P32297 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA3P32297 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA3P32297 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA3P32297 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.25■□□□□ 0.35
CHRNA3P32297 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CHRNA3P32297 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
CHRNA3P32297 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA3P32297 BCAR1-209ENST00000546196 1340 ntBASIC17.25■□□□□ 0.35
CHRNA3P32297 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA3P32297 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA3P32297 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.25■□□□□ 0.35
CHRNA3P32297 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms