Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.12■□□□□ 0.49
CTGFP29279 LETM1P2-201ENST00000597330 2178 ntBASIC18.12■□□□□ 0.49
CTGFP29279 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTGFP29279 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.12■□□□□ 0.49
CTGFP29279 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CTGFP29279 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CTGFP29279 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTGFP29279 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTGFP29279 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTGFP29279 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTGFP29279 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTGFP29279 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CTGFP29279 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CTGFP29279 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTGFP29279 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.11■□□□□ 0.49
CTGFP29279 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTGFP29279 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTGFP29279 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CTGFP29279 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC18.11■□□□□ 0.49
CTGFP29279 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CTGFP29279 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTGFP29279 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CTGFP29279 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.11■□□□□ 0.49
CTGFP29279 AC007969.1-201ENST00000433675 447 ntBASIC18.11■□□□□ 0.49
CTGFP29279 OARD1-212ENST00000482515 832 ntTSL 2 BASIC18.11■□□□□ 0.49
CTGFP29279 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CTGFP29279 AC105129.2-201ENST00000559536 390 ntBASIC18.11■□□□□ 0.49
CTGFP29279 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC18.11■□□□□ 0.49
CTGFP29279 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CTGFP29279 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC18.11■□□□□ 0.49
CTGFP29279 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC18.11■□□□□ 0.49
CTGFP29279 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTGFP29279 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC18.11■□□□□ 0.49
CTGFP29279 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTGFP29279 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC18.11■□□□□ 0.49
CTGFP29279 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
CTGFP29279 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.11■□□□□ 0.49
CTGFP29279 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTGFP29279 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.11■□□□□ 0.49
CTGFP29279 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.11■□□□□ 0.49
CTGFP29279 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.11■□□□□ 0.49
CTGFP29279 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.11■□□□□ 0.49
CTGFP29279 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CTGFP29279 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CTGFP29279 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.11■□□□□ 0.49
CTGFP29279 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.11■□□□□ 0.49
CTGFP29279 AC060834.1-201ENST00000443027 2032 ntBASIC18.11■□□□□ 0.49
CTGFP29279 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTGFP29279 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTGFP29279 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTGFP29279 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTGFP29279 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTGFP29279 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.1■□□□□ 0.49
CTGFP29279 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTGFP29279 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTGFP29279 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.1■□□□□ 0.49
CTGFP29279 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CTGFP29279 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.1■□□□□ 0.49
CTGFP29279 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTGFP29279 BNIP3P1-202ENST00000550043 1585 ntBASIC18.1■□□□□ 0.49
CTGFP29279 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CTGFP29279 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CTGFP29279 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
CTGFP29279 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.1■□□□□ 0.49
CTGFP29279 AL591846.1-201ENST00000451736 433 ntBASIC18.1■□□□□ 0.49
CTGFP29279 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC18.1■□□□□ 0.49
CTGFP29279 RPL13AP25-201ENST00000484130 612 ntBASIC18.1■□□□□ 0.49
CTGFP29279 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC18.1■□□□□ 0.49
CTGFP29279 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.1■□□□□ 0.49
CTGFP29279 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC18.1■□□□□ 0.49
CTGFP29279 COG4-212ENST00000564653 590 ntTSL 5 BASIC18.1■□□□□ 0.49
CTGFP29279 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTGFP29279 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC18.1■□□□□ 0.49
CTGFP29279 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC18.1■□□□□ 0.49
CTGFP29279 AL008638.5-201ENST00000623814 1298 ntBASIC18.1■□□□□ 0.49
CTGFP29279 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTGFP29279 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
CTGFP29279 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
CTGFP29279 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTGFP29279 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTGFP29279 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CTGFP29279 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTGFP29279 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CTGFP29279 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTGFP29279 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTGFP29279 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTGFP29279 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTGFP29279 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.09■□□□□ 0.49
CTGFP29279 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTGFP29279 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTGFP29279 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTGFP29279 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTGFP29279 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTGFP29279 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CTGFP29279 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTGFP29279 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC18.09■□□□□ 0.49
CTGFP29279 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTGFP29279 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC18.09■□□□□ 0.49
CTGFP29279 HNRNPA1P48-202ENST00000565308 961 ntBASIC18.09■□□□□ 0.49
CTGFP29279 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms