Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NELFEP18615 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
NELFEP18615 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.23■□□□□ 0.19
NELFEP18615 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.23■□□□□ 0.19
NELFEP18615 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NELFEP18615 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.23■□□□□ 0.19
NELFEP18615 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NELFEP18615 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.23■□□□□ 0.19
NELFEP18615 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
NELFEP18615 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NELFEP18615 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.23■□□□□ 0.19
NELFEP18615 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NELFEP18615 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.23■□□□□ 0.19
NELFEP18615 AC140658.5-201ENST00000438532 169 ntBASIC16.23■□□□□ 0.19
NELFEP18615 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.23■□□□□ 0.19
NELFEP18615 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.23■□□□□ 0.19
NELFEP18615 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NELFEP18615 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NELFEP18615 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NELFEP18615 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NELFEP18615 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NELFEP18615 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.23■□□□□ 0.19
NELFEP18615 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.23■□□□□ 0.19
NELFEP18615 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NELFEP18615 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
NELFEP18615 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
NELFEP18615 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NELFEP18615 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NELFEP18615 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
NELFEP18615 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NELFEP18615 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NELFEP18615 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.22■□□□□ 0.19
NELFEP18615 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
NELFEP18615 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.22■□□□□ 0.19
NELFEP18615 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
NELFEP18615 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NELFEP18615 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NELFEP18615 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.22■□□□□ 0.19
NELFEP18615 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NELFEP18615 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
NELFEP18615 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NELFEP18615 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.22■□□□□ 0.19
NELFEP18615 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NELFEP18615 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NELFEP18615 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NELFEP18615 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NELFEP18615 SLC25A1P3-201ENST00000395415 828 ntBASIC16.22■□□□□ 0.19
NELFEP18615 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NELFEP18615 METTL21AP1-201ENST00000438852 635 ntBASIC16.22■□□□□ 0.19
NELFEP18615 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NELFEP18615 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NELFEP18615 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.22■□□□□ 0.19
NELFEP18615 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
NELFEP18615 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.22■□□□□ 0.19
NELFEP18615 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.22■□□□□ 0.19
NELFEP18615 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.22■□□□□ 0.19
NELFEP18615 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NELFEP18615 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NELFEP18615 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.22■□□□□ 0.19
NELFEP18615 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NELFEP18615 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NELFEP18615 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.22■□□□□ 0.19
NELFEP18615 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NELFEP18615 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NELFEP18615 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NELFEP18615 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NELFEP18615 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NELFEP18615 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NELFEP18615 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NELFEP18615 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NELFEP18615 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NELFEP18615 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NELFEP18615 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NELFEP18615 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NELFEP18615 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NELFEP18615 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NELFEP18615 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NELFEP18615 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.21■□□□□ 0.19
NELFEP18615 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NELFEP18615 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
NELFEP18615 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
NELFEP18615 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NELFEP18615 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.21■□□□□ 0.19
NELFEP18615 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.21■□□□□ 0.19
NELFEP18615 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NELFEP18615 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NELFEP18615 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NELFEP18615 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.21■□□□□ 0.19
NELFEP18615 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NELFEP18615 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.21■□□□□ 0.19
NELFEP18615 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.21■□□□□ 0.19
NELFEP18615 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.21■□□□□ 0.19
NELFEP18615 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.21■□□□□ 0.19
NELFEP18615 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.21■□□□□ 0.19
NELFEP18615 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.21■□□□□ 0.19
NELFEP18615 AL513210.1-201ENST00000629608 234 ntBASIC16.21■□□□□ 0.19
NELFEP18615 AC105339.1-204ENST00000636249 355 ntBASIC16.21■□□□□ 0.19
NELFEP18615 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NELFEP18615 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NELFEP18615 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms